Monarch geneset OGS2.0

DPOGS210066
TranscriptDPOGS210066-TA2076 bp
ProteinDPOGS210066-PA691 aa
Genomic positionDPSCF300017 - 603233-613327
RNAseq coverage42x (Rank: top 72%)
Annotation
HeliconiusHMEL0154700.058.94% 
BombyxBGIBMGA012706-TA0.069.84% 
DrosophilaCG9153-PB1e-3128.74% 
EBI UniRef50UniRef50_E1ZWW05e-6637.98%X-linked retinitis pigmentosa GTPase regulator n=2 Tax=Formicidae RepID=E1ZWW0_CAMFO
NCBI RefSeqXP_002166895.12e-6638.27%PREDICTED: similar to retinitis pigmentosa GTPase regulator [Hydra magnipapillata]
NCBI nr blastpgi|3320258162e-6538.76%X-linked retinitis pigmentosa GTPase regulator [Acromyrmex echinatior]
NCBI nr blastxgi|3320258163e-7130.89%X-linked retinitis pigmentosa GTPase regulator [Acromyrmex echinatior]
Group
KEGG pathwaydvi:Dvir_GJ121482e-32 
 K10615 (HERC4)maps-> Ubiquitin mediated proteolysis
InterPro domain[30-353] IPR0090913.2e-86Regulator of chromosome condensation/beta-lactamase-inhibitor protein II
[33-49] IPR0004084.9e-16Regulator of chromosome condensation, RCC1
Orthology groupMCL17881 Patchy
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS210066-TA
ATGGACGGTCAGTTAGTCCGCGGTCGCGCGGTCGATCCGTGGCAATGGACTAGCGAGCCCAACGACGCCATGACTGACGATATACCAGAGAAGGGTAGAGTATTCGTTTTTGGCGCTAACGCCTGGGGACAGCTGGGTTTGGGGCATAAAGATGAAGTAACTCGTCCGAGTTGCGTCAAATTTCTCAAGCCTCACCGAGCCACGTTTGTGGCTTGTGGACGCGCGCACACTGTATTTGTTACAGATACGAACGCCATATACTCAGTGGGTTGTAACGACGAGGGCCAGCTAGGTTCAGGTGACCTTGAACATCATAGTGTTCCTCAGTATGTAGACCTGGAAGTGACAGTTAAGCAGGTCTCCGCCGGTAGCAATCACACCGCCCTGCTGACTGAGGACGGGCGTGTGTTCGTGTGTGGCTCAAACTCGGAAGGTCAGTTGGGGCTGGGCGAGGACAGACGCTCGGCGCTCTCCTTCACCGAGTTGAAGTTCATGGAGAGCATCGCGTTCGTTGAGTGCGGATATTATCACACGGTGTTCATTACAGCTAAAGGAGCAGTTTTCGTTACCGGTGACAATGAAAATCAAAAACTGGGCATTCAGAACACATCAAGTATTTTATACGTACCCCAAGTCCTACCTTTGGACGTCCACATTAAGAGCGCTTGTTGCGGTGCTAACCATACATTTCTATTGTCTATGGACGAATCAAAGATTCTCGCTTTTGGATCTAACGAAAAAGGTCAACTTGGAATGCCAAAAGAAGTGGTTAACGTGACCCTCCCCACGGAGATAGATATGGAGAAAATGTTCGACGGCTATCAGCTGAAACTTGTGGCTTGTGGCGCTATGCATACCGCTTTCGTTACAGACAATGGCCTGCTATACACGTGCGGCGAGGCGCGACACAATAAACTCTGTCTGGAGGAAACGGACGATAACACCAACTCCAACGACCTCCCCAATCAATACACACCGATGCGGGTCACCGCTATGAACGGCTTTGTAATAGACAACGTCGCCTGTGGTGGCTGCCACACGCTACTCACAGCGACTAAAGGATCCAACGTCGACTTCACCAACAACGACTTCAGTATCATAAGCGAAGAAAATAGACCTGTCTCCTTAACAGAACTGCCTCCCTTACAAAAACTTCCGGCTATGAACAAAAACGAAGATATAGCGGATTTTGTCAACGAAAATACAGAGGCTAAGAACGCTGATCTCATGAACGGGAATAATAATGAAGAAACAAAATCTATTGATTCGTTAGAGGCTAATGTGAGCGGATCACACATCGTCGATATAAATGATTTAGATAATGAAAATAAAAGTTTACATGAAGAAAAAAACATAAACGAAGCGTGCGACGGTTTAAAAAAGGATATAAAAAACGATTTCGATCATGCTGTAGATGGTGTTACCAAAGTAGTCCAAGGAACAGGAACTAAAATAGAAGAAATGGTTCAAAACAACACACGAAAAATACTTACGCAAGCAGAAGCTGTAGAGGATGTAATAAAAAAGACTGTAGCCGATAAAGTGCCCGGCTTACACCACGACGAACGGAAGGTTCTGGATATACCCAACAAAATGGAAGAGACGACCAACTCACCGCCACCGAAATCACCGATCATACAAGACTTGCTAGACATACCCGACATATCTCACGTGAGTCCTATGTTGAGTAAACACAGCGACGACGGACAAAAGAGTGAGACGGGCCAGTCGGAAAACGAGACCATACCATGCGGCTCAGACAAGTCCAGCCCCCAGGCTAAAACTAAAACTCAGGCTGTGATGCCCACAGTTCGGAGCGAAGATCACGAGGGAGAGGAACACGGGGACGTCGTGGTCCACAAACTCGAAGAGAAGGGACGTTTAGCAAGAATCTTTCAAACCATACGAGACAAAGAACACTCCTGTATGGGAAAAGGGAAAGTTATAGAAGAAAAAGTTGTCGAGAACATAAACAAAGGGATAGGAGACGCCGAGGAGACGGTCCATAGGGTCGAGGAGCGAGTGGAAACGGAAATACGGAATCATACAAATTCACGTACATGCACTATTCTGTGA

Protein sequence:

>DPOGS210066-PA
MDGQLVRGRAVDPWQWTSEPNDAMTDDIPEKGRVFVFGANAWGQLGLGHKDEVTRPSCVKFLKPHRATFVACGRAHTVFVTDTNAIYSVGCNDEGQLGSGDLEHHSVPQYVDLEVTVKQVSAGSNHTALLTEDGRVFVCGSNSEGQLGLGEDRRSALSFTELKFMESIAFVECGYYHTVFITAKGAVFVTGDNENQKLGIQNTSSILYVPQVLPLDVHIKSACCGANHTFLLSMDESKILAFGSNEKGQLGMPKEVVNVTLPTEIDMEKMFDGYQLKLVACGAMHTAFVTDNGLLYTCGEARHNKLCLEETDDNTNSNDLPNQYTPMRVTAMNGFVIDNVACGGCHTLLTATKGSNVDFTNNDFSIISEENRPVSLTELPPLQKLPAMNKNEDIADFVNENTEAKNADLMNGNNNEETKSIDSLEANVSGSHIVDINDLDNENKSLHEEKNINEACDGLKKDIKNDFDHAVDGVTKVVQGTGTKIEEMVQNNTRKILTQAEAVEDVIKKTVADKVPGLHHDERKVLDIPNKMEETTNSPPPKSPIIQDLLDIPDISHVSPMLSKHSDDGQKSETGQSENETIPCGSDKSSPQAKTKTQAVMPTVRSEDHEGEEHGDVVVHKLEEKGRLARIFQTIRDKEHSCMGKGKVIEEKVVENINKGIGDAEETVHRVEERVETEIRNHTNSRTCTIL-