DPOGS210109 | ||
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Transcript | DPOGS210109-TA | 450 bp |
Protein | DPOGS210109-PA | 149 aa |
Genomic position | DPSCF300017 + 1220140-1220719 | |
RNAseq coverage | 189x (Rank: top 48%) |
Annotation | ||||
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Heliconius | HMEL005906 | 7e-55 | 68.49% |   |
Bombyx | BGIBMGA000218-TA | 1e-41 | 60.53% |   |
Drosophila | Mes4-PA | 9e-27 | 49.02% |   |
EBI UniRef50 | UniRef50_Q9W256 | 9e-25 | 49.02% | IP14609p n=11 Tax=Drosophila RepID=Q9W256_DROME |
NCBI RefSeq | XP_001959738.1 | 1e-26 | 48.21% | GF11889 [Drosophila ananassae] |
NCBI nr blastp | gi|194754916 | 3e-25 | 48.21% | GF11889 [Drosophila ananassae] |
NCBI nr blastx | gi|328790291 | 8e-24 | 47.90% | PREDICTED: DNA polymerase epsilon subunit 4-like [Apis mellifera] |
Group | ||||
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Gene Ontology | GO:0003677 | 1e-21 | DNA binding | |
GO:0043565 | 3.3e-19 | sequence-specific DNA binding | ||
GO:0005622 | 3.3e-19 | intracellular | ||
KEGG pathway | dan:Dana_GF11889 | 3e-26 |   | |
  | K03506 (POLE4) | maps-> | Purine metabolism | |
  |   |   | Base excision repair | |
  |   |   | DNA replication | |
  |   |   | Nucleotide excision repair | |
  |   |   | Pyrimidine metabolism | |
InterPro domain | [66-134] IPR009072 | 1e-21 | Histone-fold | |
[71-133] IPR003958 | 3.3e-19 | Transcription factor CBF/NF-Y/archaeal histone | ||
Orthology group | MCL13293 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS210109-TA
ATGTCTGAGGAAGAAGAACATTGCACTGACGTCGATATATCAGATATCATAGATGATTCAGAAAACATTGGAGACAGTGAATTTTTAGGTACAGAGGTTACTGACTCAGAGTTAAGTATAATTCAAGATTCAGAAAATATAAACTCTGAAGAAACTGCATCTGAGAGGAAAGTTTCAAATACAGTTAAGGTTGACTCAGTCAAGTCTACTAGATTGCCGATGTCGAGAATTAAAAATATCATGAAAATGGACCCTGATGTTAGTATAGTAAATTCTGAAGCAGTCTTTCTAGTTACTAAAGCTACTGAATTATTTTTAGAAACGATAGCAAAAGAAACCTACTCATATACAGTACAGCATAAGAGGAAGACAATATCAAAGAAAGATCTAGAGGTAGTTATCAATAAGGTGGACTGTCTGTGTTTTTTGGAAGGAGCTATGGACTTCTAA
>DPOGS210109-PA
MSEEEEHCTDVDISDIIDDSENIGDSEFLGTEVTDSELSIIQDSENINSEETASERKVSNTVKVDSVKSTRLPMSRIKNIMKMDPDVSIVNSEAVFLVTKATELFLETIAKETYSYTVQHKRKTISKKDLEVVINKVDCLCFLEGAMDF-