Monarch geneset OGS2.0

DPOGS210129
TranscriptDPOGS210129-TA1266 bp
ProteinDPOGS210129-PA421 aa
Genomic positionDPSCF300017 + 1721503-1726881
RNAseq coverage249x (Rank: top 42%)
Annotation
HeliconiusHMEL0071998e-17673.40% 
BombyxBGIBMGA000236-TA0.085.78% 
DrosophilaCG6638-PA3e-18071.53% 
EBI UniRef50UniRef50_P264405e-16870.50%Isovaleryl-CoA dehydrogenase, mitochondrial n=869 Tax=root RepID=IVD_HUMAN
NCBI RefSeqNP_001129356.10.085.78%isovaleryl coenzyme A dehydrogenase [Bombyx mori]
NCBI nr blastpgi|2609078110.085.75%isovaleryl coenzyme A dehydrogenase [Heliothis virescens]
NCBI nr blastxgi|2609078110.085.75%isovaleryl coenzyme A dehydrogenase [Heliothis virescens]
Group
Gene OntologyGO:00166271.3e-85oxidoreductase activity, acting on the CH-CH group of donors
GO:00081521.3e-85metabolic process
GO:00551141.3e-85oxidation-reduction process
GO:00506603.7e-44flavin adenine dinucleotide binding
GO:00039953e-39acyl-CoA dehydrogenase activity
KEGG pathwayphu:Phum_PHUM6012400.0 
 K00253 (E1.3.99.10, ivd)maps-> Valine, leucine and isoleucine degradation
InterPro domain[34-276] IPR0091001.3e-85Acyl-CoA dehydrogenase/oxidase
[252-418] IPR0090751.7e-56Acyl-CoA dehydrogenase/oxidase C-terminal
[34-153] IPR0137863.7e-44Acyl-CoA dehydrogenase/oxidase, N-terminal
[263-416] IPR0060901.3e-43Acyl-CoA oxidase/dehydrogenase, type 1
[154-251] IPR0060913e-39Acyl-CoA oxidase/dehydrogenase, central domain
[38-151] IPR0060927.9e-35Acyl-CoA dehydrogenase, N-terminal
Orthology groupMCL14491 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS210129-TA
ATGGCTCTCAGATTAACGAAAGTCCGACAATTATTTAAACAATGCACAAACACATCAATTTTAAGAAATGCATCTCACTATCCGATAGACGAGAATATATTTGGTCTCTCCAGTGAACAAAAACAGCTACGTCAAATGGTTTTTGATTTCGCACAAAAAGAATTAGCACCGAAGGCGGGAGAGATAGATAGAGAAAATAATTTCAAAGAACTAAGAGAATTCTGGAAGAAGCTTGGTAATCTTGGGCTATTAGGTATTACAGCCAGTCCAGAATATGGGGGCACGGGGGGGAAATACACAGACCACTGCGTTATTATGGAAGAGCTGTCAAGGGCCTGTGGTGCGATTGCATTGTCTTACGGCGCCCATTCCAATCTGTGTGTCAACCAAATCAATAGAAATGGCACTCATGAACAAAAAAGCAAATATCTGCCAAAGGTTATCTCAGGAGAACATATAGGCGCTCTGGCGATGTCTGAGCCCGGATCAGGTAGTGACGTAGTCTCTATGAAACTACGAGCTGAAAAGAAAGGGGACTATTACGTACTCAATGGCAATAAATTCTGGATCACTAATGGACCTGACGCGGATGTTTTGGTGGTGTACGCAAAAACTAGCCTTACAAACAAACCTCAGCATGGAATATCTGCGTTTTTAGTAGAAAAGGGATTTCCGGGATTTTCCACGGCACAGAAATTAGATAAACTGGGAATGAGGGGTTCGAACACCGGCGAACTCGTCTTCGAAGACTGCAAAGTACCAGCGTCAAATCTCCTCGGTGAAGAGAATAAGGGCGTATATGTACTCATGTCAGGTCTGGATTTAGAGCGGCTAGTACTAGCCGCAGGACCTGTCGGTTTGATGCAGGCAGCGGTTGACGTAGCCTTCGACTATGCTCACACTAGAAAACAATTCGGAAAACCTATTGGTGAATTCCAATTATTACAGGCAAGTTTAATATTAGGTAAAATGGCGGATATGTACACAACGCTAAGTGCGTGTAGAAGTTATTTGTACAATGTAGCAAAGTCCTGTGATGAAGGACATGTTAACAGCAAAGATTGCGCAGGAGTTATTTTGTACTGCGCGGAAAAAGCCACGAAAATCGCTCTTGACGCTATTCAGATATTAGGTGGCAATGGATATATCAACGATTATCCCACGGGCAGAATTATGAGAGATGCTAAACTTTATGAAATAGGAGCTGGTACTTCAGAAGTCAGAAGAATGTTGATAGGCAGGGCACTGAACAGTGAATATAAATAA

Protein sequence:

>DPOGS210129-PA
MALRLTKVRQLFKQCTNTSILRNASHYPIDENIFGLSSEQKQLRQMVFDFAQKELAPKAGEIDRENNFKELREFWKKLGNLGLLGITASPEYGGTGGKYTDHCVIMEELSRACGAIALSYGAHSNLCVNQINRNGTHEQKSKYLPKVISGEHIGALAMSEPGSGSDVVSMKLRAEKKGDYYVLNGNKFWITNGPDADVLVVYAKTSLTNKPQHGISAFLVEKGFPGFSTAQKLDKLGMRGSNTGELVFEDCKVPASNLLGEENKGVYVLMSGLDLERLVLAAGPVGLMQAAVDVAFDYAHTRKQFGKPIGEFQLLQASLILGKMADMYTTLSACRSYLYNVAKSCDEGHVNSKDCAGVILYCAEKATKIALDAIQILGGNGYINDYPTGRIMRDAKLYEIGAGTSEVRRMLIGRALNSEYK-