| DPOGS210203 | ||
|---|---|---|
| Transcript | DPOGS210203-TA | 387 bp |
| Protein | DPOGS210203-PA | 128 aa |
| Genomic position | DPSCF300283 + 245309-247027 | |
| RNAseq coverage | 4453x (Rank: top 3%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL009530 | 2e-46 | 68.75% | |
| Bombyx | BGIBMGA003238-TA | 6e-60 | 80.47% | |
| Drosophila | CG3214-PB | 7e-42 | 60.00% | |
| EBI UniRef50 | UniRef50_Q9VQD7 | 1e-39 | 60.00% | CG3214, isoform A n=33 Tax=Bilateria RepID=Q9VQD7_DROME |
| NCBI RefSeq | XP_969714.1 | 3e-47 | 65.87% | PREDICTED: similar to AGAP008653-PA [Tribolium castaneum] |
| NCBI nr blastp | gi|91085133 | 7e-46 | 65.87% | PREDICTED: similar to AGAP008653-PA [Tribolium castaneum] |
| NCBI nr blastx | gi|91085133 | 3e-49 | 66.40% | PREDICTED: similar to AGAP008653-PA [Tribolium castaneum] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0016020 | 2.9e-40 | membrane | |
| GO:0009055 | 2.9e-40 | electron carrier activity | ||
| GO:0008137 | 2.9e-40 | NADH dehydrogenase (ubiquinone) activity | ||
| KEGG pathway | pic:PICST_44890 | 5e-14 | ||
| K00329 (E1.6.5.3) | maps-> | Oxidative phosphorylation | ||
| InterPro domain | [1-127] IPR007763 | 2.9e-40 | NADH:ubiquinone oxidoreductase, 17.2kDa subunit | |
| Orthology group | MCL14310 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS210203-TA
ATGGTCAAGCAGAATGGTGGTATCAGAGGCTCTTTGTACAAACTTTACAGGCAAGAAGAATTGAAAGACGGCGTTTTAGTCGGTGAAGATGAATTAGGAAACAAGTACTACGAGAATCCGCGCTACTTCTACAGCAGGAATCGTTGGGTGGAATACAATGACAAAGCCTATTTGAACTATGACGGCAGCCAAGTGTCTGCTGAATGGTACGGCTGGCTTCATTACAAAACCGATCTTCCACCCCATAAGGATCCAAGCCGTCCTAAATACAAATGGATGGCTGAATTCACTGAGAACATGTCTGGAACCACCGGCCAATACGTACCATACAGCACAACTCGCGAAAAAGTTGAGGCTTGGGTACCGAAACAGAAAAGCAGTGCTTGA
>DPOGS210203-PA
MVKQNGGIRGSLYKLYRQEELKDGVLVGEDELGNKYYENPRYFYSRNRWVEYNDKAYLNYDGSQVSAEWYGWLHYKTDLPPHKDPSRPKYKWMAEFTENMSGTTGQYVPYSTTREKVEAWVPKQKSSA-