| DPOGS210222 | ||
|---|---|---|
| Transcript | DPOGS210222-TA | 324 bp |
| Protein | DPOGS210222-PA | 107 aa |
| Genomic position | DPSCF300196 - 513309-513878 | |
| RNAseq coverage | 1817x (Rank: top 7%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL021837 | 4e-19 | 58.95% | |
| Bombyx | BGIBMGA002548-TA | 5e-22 | 60.38% | |
| Drosophila | Cpr65Av-PA | 2e-21 | 41.96% | |
| EBI UniRef50 | UniRef50_G6DLI8 | 1e-34 | 79.44% | Cuticular protein RR-1 motif 5 n=2 Tax=Obtectomera RepID=G6DLI8_DANPL |
| NCBI RefSeq | XP_001866507.1 | 3e-23 | 48.11% | conserved hypothetical protein [Culex quinquefasciatus] |
| NCBI nr blastp | gi|56462126 | 2e-22 | 62.96% | cuticle protein 1 [Lonomia obliqua] |
| NCBI nr blastx | gi|56462126 | 6e-30 | 65.09% | cuticle protein 1 [Lonomia obliqua] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0042302 | 3.9e-14 | structural constituent of cuticle | |
| KEGG pathway | ||||
| InterPro domain | [43-98] IPR000618 | 3.9e-14 | Insect cuticle protein | |
| Orthology group | MCL19885 | Specific divergent | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS210222-TA
ATGAAATCTTTCATTGTATTCGTTCTGTTCGTGGCCGTCGCCGTCGCCGTCCCTGTGTACGACGCCTCGGCAGACAAAGCCGCCAGCGTGGTCAGGTTCGACCTAAACAACATCGGAGTCAACGGTTACGACTTCGCCTACGAGACCAGTGACGGTAAGGTTGCCTCTGAGGTTGCCGAGCTGAAGAACGCCGGATTAGAGAACGAGGGTCTTGAAGTGCGTGGTTTCTTCAGCTATCCTGGTGTTGATGGCAAGATTTACCGCGTAGACTACGTCGCCAACGACAAGGGCTTCCAACCATCAGCTGCCCATCTCCCCGCCTAA
>DPOGS210222-PA
MKSFIVFVLFVAVAVAVPVYDASADKAASVVRFDLNNIGVNGYDFAYETSDGKVASEVAELKNAGLENEGLEVRGFFSYPGVDGKIYRVDYVANDKGFQPSAAHLPA-