DPOGS210223 | ||
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Transcript | DPOGS210223-TA | 300 bp |
Protein | DPOGS210223-PA | 99 aa |
Genomic position | DPSCF300196 - 509916-510294 | |
RNAseq coverage | 12x (Rank: top 83%) |
Annotation | ||||
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Heliconius | HMEL021837 | 2e-17 | 56.16% |   |
Bombyx | BGIBMGA002548-TA | 2e-21 | 59.76% |   |
Drosophila | Cpr65Av-PA | 9e-20 | 41.84% |   |
EBI UniRef50 | UniRef50_G6DLI8 | 3e-36 | 84.09% | Cuticular protein RR-1 motif 5 n=2 Tax=Obtectomera RepID=G6DLI8_DANPL |
NCBI RefSeq | XP_316036.1 | 4e-20 | 54.88% | cuticular protein 21, RR-1 family (AGAP005996-PA) [Anopheles gambiae str. PEST] |
NCBI nr blastp | gi|189031278 | 7e-21 | 64.20% | cuticle protein 1 [Helicoverpa armigera] |
NCBI nr blastx | gi|189031278 | 9e-23 | 58.16% | cuticle protein 1 [Helicoverpa armigera] |
Group | ||||
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Gene Ontology | GO:0042302 | 4.1e-15 | structural constituent of cuticle | |
KEGG pathway |   | |||
InterPro domain | [35-90] IPR000618 | 4.1e-15 | Insect cuticle protein | |
Orthology group | MCL19885 |   | Specific divergent |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS210223-TA
ATGGCTGTGGCCGCAGCCGCCTCAGTCCCGATCTATGACATCTCAGGAGACAAAGCTGCCAAGGTCATCAAGTTCGACCTGAACAACATCGGAGTCAACGGTTACGACTTCGCCTACGAGACCAGTGATGGTAAGGTTGCCTCTGAGGTTGCTGAGCTGAAGAACGCCGGATTAGAGAACGAGGGTCTTGAAGTGCGTGGTTTCTTCAGCTACCCTGGTGATGATGGCAAGATTTACCGCGTAGACTACGTCGCCAACGACAAGGGCTTCCAACCATCAGCTGCCCATCTCCCCGCCTAA
>DPOGS210223-PA
MAVAAAASVPIYDISGDKAAKVIKFDLNNIGVNGYDFAYETSDGKVASEVAELKNAGLENEGLEVRGFFSYPGDDGKIYRVDYVANDKGFQPSAAHLPA-