DPOGS210226 | ||
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Transcript | DPOGS210226-TA | 300 bp |
Protein | DPOGS210226-PA | 99 aa |
Genomic position | DPSCF300196 - 500207-500620 | |
RNAseq coverage | 3x (Rank: top 90%) |
Annotation | ||||
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Heliconius | HMEL021837 | 4e-19 | 63.77% |   |
Bombyx | BGIBMGA002548-TA | 1e-22 | 62.03% |   |
Drosophila | Cpr65Av-PA | 4e-20 | 46.34% |   |
EBI UniRef50 | UniRef50_G6DLI8 | 5e-50 | 100.00% | Cuticular protein RR-1 motif 5 n=2 Tax=Obtectomera RepID=G6DLI8_DANPL |
NCBI RefSeq | XP_970381.1 | 4e-21 | 50.00% | PREDICTED: similar to cuticle protein 1 [Tribolium castaneum] |
NCBI nr blastp | gi|56462126 | 4e-22 | 62.96% | cuticle protein 1 [Lonomia obliqua] |
NCBI nr blastx | gi|56462126 | 3e-25 | 61.22% | cuticle protein 1 [Lonomia obliqua] |
Group | ||||
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Gene Ontology | GO:0042302 | 1.1e-15 | structural constituent of cuticle | |
KEGG pathway |   | |||
InterPro domain | [35-90] IPR000618 | 1.1e-15 | Insect cuticle protein | |
Orthology group | MCL19885 |   | Specific divergent |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS210226-TA
ATGTTCGTGGCCGCAGCCGTTGCTGTCCCAGTTTACAACTTCTCAGGAGCCAAAGCAGCCAAGGTCATCAAGTTCAACCTGAACAACATCGGTGTCAATGGTTACGACTACGCCTATGAGACCAGTGACGGCAAGCTTGCCTCTGAAATGGCTGTATTGAAGAACGCCGGATTAGAGAACGAGAGTCTTGAAGTGCGTGGTTTCTTCAGCTACCTTGGTGATGATGGCAAGGTTTACCGCGTAGACTACGTCGCCAACGAAAACGGCTTCCAACCATCAGCTCCTCATCTCCCCGCCTAA
>DPOGS210226-PA
MFVAAAVAVPVYNFSGAKAAKVIKFNLNNIGVNGYDYAYETSDGKLASEMAVLKNAGLENESLEVRGFFSYLGDDGKVYRVDYVANENGFQPSAPHLPA-