Monarch geneset OGS2.0

DPOGS210318
TranscriptDPOGS210318-TA843 bp
ProteinDPOGS210318-PA280 aa
Genomic positionDPSCF300025 - 918992-921268
RNAseq coverage4040x (Rank: top 3%)
Annotation
HeliconiusHMEL0051304e-13784.34% 
BombyxBGIBMGA011599-TA4e-13682.50% 
Drosophilal(1)G0320-PA1e-7951.82% 
EBI UniRef50UniRef50_G6CKX96e-162100.00%Signal sequence receptor n=7 Tax=Coelomata RepID=G6CKX9_DANPL
NCBI RefSeqNP_001091760.11e-13482.50%signal sequence receptor [Bombyx mori]
NCBI nr blastpgi|1482986673e-13382.50%signal sequence receptor precursor [Bombyx mori]
NCBI nr blastxgi|3085128095e-13485.41%signal sequence receptor [Biston betularia]
Group
Gene OntologyGO:00057831.3e-111endoplasmic reticulum
KEGG pathwayaga:AgaP_AGAP0017213e-79 
 K13249 (SSR1)maps-> Protein processing in endoplasmic reticulum
InterPro domain[2-280] IPR0055951.3e-111Translocon-associated protein (TRAP), alpha subunit
Orthology groupMCL17016 Patchy
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS210318-TA
ATGAAACTATTTTTTATTACGTTATTGGTTCTACCGGCACTACTCTGCTTCCAAAGCTCCAGCACAATATTTGCTAGAGCAGATGAGGATGAACTTGATGATGTAGTGGACATTGAGGGTGAAGACAACCAGGTGGTGGGAGACGACGCTCTTGGTGATGACGATGATTCAATTGTTAAATCATCACAAGATGTTGACACAACTATACTGTTCATGAAACCCATCACCAGTTATGGTGATGTGGCATTCGATCTTCAAGCTGGCTACCCTGTTGAGTTCCTCGTTGGCTTCATTAACAAGGGCTCTGAAGACTACATCGTTGAGACTATGGAGGCCTCTTTCCGTTATCCCATGGACTACAACTATTACATTCAGAATTTCACAGCACTACCTTACTACAGAGAGGTCAAGCCTAAACAAGAGGCTACATTCGCTTACTCATTCATCCCCAACGAGGCTTATGCCGGACGTCCATTCGGACTTAACATTCAGCTCAACTATAGAGACGCCAGCGGAAACTACTATCAGGAAGCCGTATACAACCAGACAATCAACATTGTCGAAGTATCCGAAGGACTTGATGGAGAGACATTTTTCTTGTATGTCTTCCTTGGTGCAGCCTGTGTGTTGACTTTAGTTCTTGGACAACAAGCATTATCTTCACTCGCAAGAAGATCAAGGTCCCCACGATCCGTGTCTAAGCCCATTGAGACCGGAACTGCCACTAATGTCGACTATGACTGGTTGCCAAAGGATGTGGCTAACCAACTTAAAAAATCACCCAAAACCCCCAAACAGTCACCACGCGCGAGGAAAGCGAAAAGATCTGCCGGCGATGATTAG

Protein sequence:

>DPOGS210318-PA
MKLFFITLLVLPALLCFQSSSTIFARADEDELDDVVDIEGEDNQVVGDDALGDDDDSIVKSSQDVDTTILFMKPITSYGDVAFDLQAGYPVEFLVGFINKGSEDYIVETMEASFRYPMDYNYYIQNFTALPYYREVKPKQEATFAYSFIPNEAYAGRPFGLNIQLNYRDASGNYYQEAVYNQTINIVEVSEGLDGETFFLYVFLGAACVLTLVLGQQALSSLARRSRSPRSVSKPIETGTATNVDYDWLPKDVANQLKKSPKTPKQSPRARKAKRSAGDD-