DPOGS210325 | ||
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Transcript | DPOGS210325-TA | 465 bp |
Protein | DPOGS210325-PA | 154 aa |
Genomic position | DPSCF300025 - 677117-688059 | |
RNAseq coverage | 1010x (Rank: top 13%) |
Annotation | ||||
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Heliconius | HMEL008905 | 9e-41 | 97.40% |   |
Bombyx | BGIBMGA011963-TA | 4e-39 | 91.36% |   |
Drosophila | CG7220-PE | 2e-70 | 80.95% |   |
EBI UniRef50 | UniRef50_Q96B02 | 2e-65 | 74.00% | Ubiquitin-conjugating enzyme E2 W n=93 Tax=Eukaryota RepID=UBE2W_HUMAN |
NCBI RefSeq | XP_974790.1 | 4e-78 | 87.66% | PREDICTED: similar to AGAP005324-PB [Tribolium castaneum] |
NCBI nr blastp | gi|91079008 | 7e-77 | 87.66% | PREDICTED: similar to AGAP005324-PB [Tribolium castaneum] |
NCBI nr blastx | gi|91079008 | 2e-77 | 87.66% | PREDICTED: similar to AGAP005324-PB [Tribolium castaneum] |
Group | ||||
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Gene Ontology | GO:0016881 | 1e-35 | acid-amino acid ligase activity | |
KEGG pathway | tca:663661 | 1e-77 |   | |
  | K10688 (UBE2W, UBC16) | maps-> | Ubiquitin mediated proteolysis | |
InterPro domain | [3-124] IPR016135 | 6.2e-43 | Ubiquitin-conjugating enzyme/RWD-like | |
[10-145] IPR000608 | 1e-35 | Ubiquitin-conjugating enzyme, E2 | ||
Orthology group | MCL12647 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS210325-TA
ATGGCGGCTATGTCCCCGTCGGAGCGACGTTTACAGAAAGAGCTTATGTCGTTGATGAAGGAACCTCCACCAGGTGTCACGGTTGACGGAGACCAGGCCAGCCAAAATCTGACACTGTGGACAGTTCACATGGAAGGTGTCCCCGGAACACTTTACGAGGGTGAAAAATTTGTATTGCAGTTTAAATTCACTAATAAATATCCCTTCGATTCGCCTGAGGTGACCTTCGTGGGTAACAATATCCCGGTCCACCCGCACGTGTACTCCAACGGCCACATCTGTTTGTCCATCCTCACCGACGACTGGTCGCCGGCGCTCTCCGTACAGTCCGTCTGTCTCTCGATAGTTTCCATGCTCAGTAGCTGTAAGGAGAAGAAACGGCCGCCGGATAATTCGTTTTACGTTAAGACATGCAACAAAAACCCCAAAAAAACGAAATGGTGGTACCATGATGATTCAGTTTAA
>DPOGS210325-PA
MAAMSPSERRLQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYPFDSPEVTFVGNNIPVHPHVYSNGHICLSILTDDWSPALSVQSVCLSIVSMLSSCKEKKRPPDNSFYVKTCNKNPKKTKWWYHDDSV-