MonarchBase - Protein-coding gene

DPOGS210364
Transcript	DPOGS210364-TA	1290 bp
Protein	DPOGS210364-PA	429 aa
Genomic position	DPSCF300025 + 467687-468976
RNAseq coverage	45x (Rank: top 71%)

Annotation
*Heliconius*	HMEL013833	1e-154	62.36%
*Bombyx*	BGIBMGA011921-TA	2e-141	60.83%
*Drosophila*	Snp-PI	2e-38	33.64%
EBI UniRef50	UniRef50_UPI00017930EC	1e-69	40.22%	UPI00017930EC related cluster n=1 Tax=unknown RepID=UPI00017930EC
NCBI RefSeq	XP_001948838.1	2e-70	40.22%	PREDICTED: similar to RNA-binding protein 40 (RNA-binding motif protein 40) (RNA-binding region-containing protein 3) [Acyrthosiphon pisum]
NCBI nr blastp	gi\|193683830	5e-69	40.22%	PREDICTED: RNA-binding protein 40-like [Acyrthosiphon pisum]
NCBI nr blastx	gi\|189235800	1e-71	40.74%	PREDICTED: similar to RNA-binding region (RNP1, RRM) containing 3 [Tribolium castaneum]

Group
Gene Ontology	GO:0000166	3e-20	nucleotide binding
	GO:0003676	6.2e-12	nucleic acid binding
KEGG pathway
InterPro domain	[332-423] IPR012677	3e-20	Nucleotide-binding, alpha-beta plait
	[340-418] IPR000504	6.2e-12	RNA recognition motif domain
Orthology group	MCL14078		Single-copy universal gene

Nucleotide sequence:

>DPOGS210364-TA
ATGTCTGCGGTCTTAATTATAAAACACCTGCCACCAAACTTATCTTTCCAAGATAAGGAAAAGTTATTGCATCATTTCGGAGCTGAGAAGGTATGGGGACCCGAGAAAAGAGATTATGTGTTTGCTTCGTTTTCTACTAAAGAAAAAGCAAAAATATCTTTGCAGCGTCTCCATCAACTGGAAATAGCTAATAGACGTTTAGTCGTTGAATATTCGTTCGAAAAAGAACCGACGCTACAGACAAAACAGAATGAAGACTCAGTTTCAGACACCACAAAACATATAAGAGAGTTCTTGCGGACTCTTAACGCTTGGAATCCTTCTGTGGATTTTTACCAACCACCACCAATACATCTTAAATATAAATATCCTACAGCAAATTCTGTAGTATGTATAAATATTTTGTATTCACTCCTTCTACATAAACCGTTTTACATTCAAACATTACATCTCATGAACAAAATGAGCTTAGAGCCACCCTTTGAAGAAAATGAAAAAGCTTTAAATTATTTTAAGGAGACTTTTAGGGAATATTTTCTGGATGAGATTTATATTACTGCCCCTAATGAACCCAGCGAGTCAGAAATATCCAGTGATGATAATACAGTGCAGCCAAAGGAACATTTACCTTCAATGGTGAAAAGGAAGCATTTGCTGCCTAAGACAAGGAAACGGGCTGCAGCAGTGTTGTCGACAGCCAATCTACCGATGTCTAAAAGAGAAAAACCTACAAACCAGGAAGATGTGTTTGAAGTCGTCGCTCCTGTTGCTGAAGCCAAAAAAATATCATTGGTTGTGTCACATGATGCTCTACAGAAGCAGACTGAAATCCCTGAAGTAGTGGGTGAGTTGGGAAAGTTTCAGAAGGAAGAACAAAGCTCAGTTCAAGAAGAGAAAGTTGAGGAACCCGATAAACCATCAATAACAAAAAAGGAAATTTTGAAGAATAGACTATCTTACAGGGAAATGAAGGGGTTACCAGTTTTCAAAAACTATCATCCTGGGGAACCATCTATGAGACTATACATAAAAAATCTGGCAAAAAACGTAACAGAACAAGATGTACAAAGAATCTATAAAAGATACATGGAAGACATCCCTGAAGAGGAGCGGGTTGGATTTGATGTAAGGGTCATGCAAGAGGGACGAATGAAGGGACAGGCTTTTGTTACGTTTCCATCAATAAAGTTGGCAGAACAGGCTCTCAGTGAAACAAATGGGTTCATATTGAATGACAAACCGATGGTTGTACAATTTGCTAGGGCTGCTATTAAAAAAACTGTTGAATAA

Protein sequence:

>DPOGS210364-PA
MSAVLIIKHLPPNLSFQDKEKLLHHFGAEKVWGPEKRDYVFASFSTKEKAKISLQRLHQLEIANRRLVVEYSFEKEPTLQTKQNEDSVSDTTKHIREFLRTLNAWNPSVDFYQPPPIHLKYKYPTANSVVCINILYSLLLHKPFYIQTLHLMNKMSLEPPFEENEKALNYFKETFREYFLDEIYITAPNEPSESEISSDDNTVQPKEHLPSMVKRKHLLPKTRKRAAAVLSTANLPMSKREKPTNQEDVFEVVAPVAEAKKISLVVSHDALQKQTEIPEVVGELGKFQKEEQSSVQEEKVEEPDKPSITKKEILKNRLSYREMKGLPVFKNYHPGEPSMRLYIKNLAKNVTEQDVQRIYKRYMEDIPEEERVGFDVRVMQEGRMKGQAFVTFPSIKLAEQALSETNGFILNDKPMVVQFARAAIKKTVE-

Monarch geneset OGS2.0

Nucleotide sequence:

Protein sequence: