DPOGS210372 | ||
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Transcript | DPOGS210372-TA | 525 bp |
Protein | DPOGS210372-PA | 174 aa |
Genomic position | DPSCF300025 + 655037-656309 | |
RNAseq coverage | 11629x (Rank: top 1%) |
Annotation | ||||
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Heliconius | HMEL013853 | 2e-76 | 76.61% |   |
Bombyx | BGIBMGA011936-TA | 5e-77 | 78.57% |   |
Drosophila | ATPsyn-d-PB | 4e-56 | 56.82% |   |
EBI UniRef50 | UniRef50_Q24251 | 4e-54 | 56.82% | ATP synthase subunit d, mitochondrial n=27 Tax=Pancrustacea RepID=ATP5H_DROME |
NCBI RefSeq | NP_001093279.1 | 1e-75 | 78.57% | H+ transporting ATP synthase subunit d [Bombyx mori] |
NCBI nr blastp | gi|153791739 | 2e-74 | 78.57% | H+ transporting ATP synthase subunit d [Bombyx mori] |
NCBI nr blastx | gi|153791739 | 9e-77 | 78.36% | H+ transporting ATP synthase subunit d [Bombyx mori] |
Group | ||||
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Gene Ontology | GO:0015986 | 1.8e-84 | ATP synthesis coupled proton transport | |
GO:0000276 | 1.8e-84 | mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) | ||
GO:0015078 | 1.8e-84 | hydrogen ion transmembrane transporter activity | ||
KEGG pathway | dan:Dana_GF16047 | 3e-56 |   | |
  | K02138 (ATPeFD, ATP5H) | maps-> | Huntington's disease | |
  |   |   | Oxidative phosphorylation | |
  |   |   | Alzheimer's disease | |
  |   |   | Parkinson's disease | |
InterPro domain | [1-174] IPR008689 | 1.8e-84 | ATPase, F0 complex, subunit D, mitochondrial | |
Orthology group | MCL11485 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS210372-TA
ATGGCGAAACGTATAAGCCAGAGCTCTATCAACTGGGCCGCCCTAGCCGAGAGGGTCCCTGCGGAACAAAAGTCGAACTTAGCTGCTTTTAAAGTTAAGTCTGATGGCTACCTTCGCAGGGTATTGGCTAGCCCTCCGGAGCCACCAAAGATCAACTGGGCAAATTACAAGCAGGTTGTTCCCATACCCGGCATGGTGGACAACTTCCAAAAACAGTATGAAGCCCTCAAGATCCCATACCCCTCGGACACCATGACTGCTAAGGTTGAGGCTCAGTGGGGGGAAATTAAGAAGGCCATTGAATCATTTGTCCAGGAATCAAACAAAAACATTGCTAAATACCAACAGCAAATTGATGAACTCAATGCCCTGCTGCCATACAACCAGATGACTCTAGAAGACTTCAAGGATGCCCACCCTGAATTGGCCATTGACCCCATCAATAAGCCGACCTTCTGGCCGCACACACCAGAGGAACAGCCAGACTATGTCGACCCCGAAAAACCAGCACAGAGCGGCCACTGA
>DPOGS210372-PA
MAKRISQSSINWAALAERVPAEQKSNLAAFKVKSDGYLRRVLASPPEPPKINWANYKQVVPIPGMVDNFQKQYEALKIPYPSDTMTAKVEAQWGEIKKAIESFVQESNKNIAKYQQQIDELNALLPYNQMTLEDFKDAHPELAIDPINKPTFWPHTPEEQPDYVDPEKPAQSGH-