DPOGS210406 | ||
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Transcript | DPOGS210406-TA | 441 bp |
Protein | DPOGS210406-PA | 146 aa |
Genomic position | DPSCF300558 - 12458-13472 | |
RNAseq coverage | 252x (Rank: top 42%) |
Annotation | ||||
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Heliconius | HMEL022551 | 4e-54 | 66.90% |   |
Bombyx | BGIBMGA001679-TA | 4e-37 | 70.97% |   |
Drosophila | CG3893-PA | 2e-09 | 27.91% |   |
EBI UniRef50 | UniRef50_B0WM12 | 5e-17 | 36.76% | Putative uncharacterized protein n=2 Tax=Culicinae RepID=B0WM12_CULQU |
NCBI RefSeq | XP_001849746.1 | 8e-18 | 36.76% | conserved hypothetical protein [Culex quinquefasciatus] |
NCBI nr blastp | gi|170044205 | 2e-16 | 36.76% | conserved hypothetical protein [Culex quinquefasciatus] |
NCBI nr blastx | gi|170044205 | 2e-17 | 38.35% | conserved hypothetical protein [Culex quinquefasciatus] |
Group | ||||
---|---|---|---|---|
KEGG pathway | ame:413757 | 5e-12 |   | |
  | K02728 (PSMA4) | maps-> | Proteasome | |
InterPro domain | [11-135] IPR007917 | 1.4e-14 | Uncharacterised protein family UPF0224 | |
[41-66] IPR022776 | 4.8e-08 | TRM13/UPF0224 family, U11-48K-like CHHC zinc finger domain | ||
Orthology group | MCL10275 |   | Insect specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS210406-TA
ATGGCGGCCCCCGCACCACATCAGATGACAACCTGTCCATACAATAAAGCACATCAAGTAGAGCATTACCGAATGCACATCCACCTTCAGAAGTGTCGTAAACAGCACCCTAATTGCAACAAAATGACCTGCCCGTTTGATACCACACACGTCGTAAATGACGTAGAATTAGATTACCACATATCGGTGTGCCCCAAACGTGAAATGCTAGACTCACAGATGTATGTCATTGACAATGATCACCGTCCTCAAGTTGAAGTTACAGCACCGACTCATGTGCCGTGCGAAGAAAATTGGGAGGACTCGAATGTGACGTCCTATCAACCAGATCTAGCTAAGAAAAGTCATCATATTATAATGAAAGTTAAAGGTGCAACTCCGTCGGAGAGACGGAAGGCTAGAATGGAAGCCATCAAGACATACAGGGGCTCGGAGAATTGA
>DPOGS210406-PA
MAAPAPHQMTTCPYNKAHQVEHYRMHIHLQKCRKQHPNCNKMTCPFDTTHVVNDVELDYHISVCPKREMLDSQMYVIDNDHRPQVEVTAPTHVPCEENWEDSNVTSYQPDLAKKSHHIIMKVKGATPSERRKARMEAIKTYRGSEN-