DPOGS210435 | ||
---|---|---|
Transcript | DPOGS210435-TA | 1659 bp |
Protein | DPOGS210435-PA | 552 aa |
Genomic position | DPSCF300062 - 252579-255988 | |
RNAseq coverage | 11903x (Rank: top 1%) |
Annotation | ||||
---|---|---|---|---|
Heliconius | HMEL004163 | 0.0 | 91.69% |   |
Bombyx | BGIBMGA001853-TA | 0.0 | 97.27% |   |
Drosophila | blw-PA | 0.0 | 88.93% |   |
EBI UniRef50 | UniRef50_P35381 | 0.0 | 88.93% | ATP synthase subunit alpha, mitochondrial n=2211 Tax=root RepID=ATPA_DROME |
NCBI RefSeq | NP_001040233.1 | 0.0 | 97.27% | ATP synthase [Bombyx mori] |
NCBI nr blastp | gi|114052278 | 0.0 | 97.27% | ATP synthase [Bombyx mori] |
NCBI nr blastx | gi|114052278 | 0.0 | 97.27% | ATP synthase [Bombyx mori] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0045261 | 2.1e-242 | proton-transporting ATP synthase complex, catalytic core F(1) | |
GO:0015986 | 2.1e-242 | ATP synthesis coupled proton transport | ||
GO:0046961 | 2.1e-242 | proton-transporting ATPase activity, rotational mechanism | ||
GO:0046933 | 2.1e-242 | hydrogen ion transporting ATP synthase activity, rotational mechanism | ||
GO:0005524 | 3.3e-71 | ATP binding | ||
GO:0015991 | 5.3e-47 | ATP hydrolysis coupled proton transport | ||
GO:0033178 | 5.3e-47 | proton-transporting two-sector ATPase complex, catalytic domain | ||
GO:0016820 | 5.3e-47 | hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | ||
GO:0046034 | 1.1e-30 | ATP metabolic process | ||
GO:0016469 | 1.1e-30 | proton-transporting two-sector ATPase complex | ||
GO:0015992 | 1.1e-30 | proton transport | ||
KEGG pathway | tca:655823 | 0.0 |   | |
  | K02132 (ATPeF1A, ATP5A1) | maps-> | Huntington's disease | |
  |   |   | Oxidative phosphorylation | |
  |   |   | Alzheimer's disease | |
  |   |   | Parkinson's disease | |
InterPro domain | [45-549] IPR005294 | 2.1e-242 | ATPase, F1 complex, alpha subunit | |
[189-413] IPR000194 | 3.3e-71 | ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain | ||
[421-551] IPR000793 | 5.3e-47 | ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal | ||
[66-133] IPR023366 | 1.6e-33 | ATPase, F1/A1 complex, alpha subunit, N-terminal | ||
[50-135] IPR018118 | 1.1e-30 | ATPase, F1/A1 complex, alpha/beta subunit, N-terminal | ||
[67-133] IPR004100 | 2.5e-19 | ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal | ||
Orthology group | MCL14253 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
---|
>DPOGS210435-TA
ATGTCTCTAATCTCCGCTCGTTTGGCCTCCTCGGTGGCCAGGCGCTTGCCTAATGCCGCTACACAGGCTTCGAAGGTCGCCGTGCCCGCGGTGGCTGTGGCTGCGCGCAAGATTCACGTCTCGTGCACACAACGGGCTGCCGAAATCTCCCAAATTTTGGAGGAGAGAATCCTCGGTGCTGCACCCAAGGCCGACTTAGAAGAAACTGGCCGTGTATTGAGCATCGGTGACGGTATTGCCCGTGTGTATGGTCTCAAGAACATTCAGGCCGAGGAGATGGTGGAATTCTCCTCCGGTCTTAAGGGTATGGCCCTCAACTTGGAGCCTGACAATGTCGGTGTGGTAGTATTCGGTAACGACAAGCTGATTAAGGAAGGAGATATAGTTAAACGTACCGGTGCCATCGTGGACGTGCCCGTCGGTGAACAACTGCTGGGTCGTGTAGTCGATGCCCTCGGTAATGCCATTGATGGCAAGGGACCCATCGCCACCAAGTCTCGTATGCGTGTTGGTATCAAGGCCCCTGGTATCATACCCCGTGTATCTGTACGGGAGCCCATGCAGACTGGTATCAAGGCCGTCGACTCGTTGGTGCCAATCGGTCGTGGGCAACGTGAGCTGATCATCGGCGACCGTCAGACCGGTAAGACCGCCCTGGCCATCGACACCATCATCAACCAACAGCGGTTCAACAAAGGCGAGGACGAGAAGAAGAAGCTGTACTGCATTTACGTCGCCATTGGACAGAAGAGGTCCACCGTCGCACAGATCGTAAAGAGACTGACTGATGCCGGTGCCATCAACTACACCATCATCGTGTCCGCCACCGCCTCTGACGCCGCTCCCCTGCAGTACTTGGCGCCCTACTCCGGCTGCGCCATGGGAGAGTTCTTCCGTGACAACGGCAAGCACGCCCTCATCATCTACGACGATCTGTCCAAACAGGCCGTTGCCTACCGTCAGATGTCTCTGCTGCTCCGTCGTCCCCCCGGTCGTGAGGCTTACCCCGGTGACGTATTCTACCTCCACTCTCGTCTGCTCGAGCGTGCGGCTAAGATGTCCGACAAAATGGGTGGTGGATCCCTGACCGCTCTCCCCGTCATCGAGACCCAGGCTGGTGATGTATCAGCTTACATTCCCACCAACGTGATCTCTATCACTGATGGACAAATCTTCTTGGAAACTGAGCTGTTCTACAAGGGTATCCGTCCAGCCATCAACGTCGGTCTGTCTGTGTCCCGCGTAGGTTCCGCTGCTCAGACCAAGGCTATGAAACAGGTGGCCGGTTCCATGAAACTGGAATTGGCTCAATACCGTGAGGTAGCCGCGTTCGCCCAATTCGGCTCAGACTTGGATGCCGCCACCCAGCAGTTGTTGAACCGTGGTATGCGTCTTACTGAGCTGCTCAAACAGGGCCAGTACGTGCCAATGGCCATTGAAGAACAGGTTGCCATTATCTACTGTGGTGTGCGTGGACATCTTGACAAGTTGGACCCAACCAAGATCACTGCCTTCGAAAAGGAATTCACCCAGCACATCAAAACCAGCCACCAGGGTCTGCTCAACACCATCGCCAAGGACGGACAGATCACCCCCGAATCTGACGCCTCATTGAAGAAGATCGTCTCAGACTTCCTTGCTACCTTCCAAGCACAATAA
>DPOGS210435-PA
MSLISARLASSVARRLPNAATQASKVAVPAVAVAARKIHVSCTQRAAEISQILEERILGAAPKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQLLGRVVDALGNAIDGKGPIATKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLDPTKITAFEKEFTQHIKTSHQGLLNTIAKDGQITPESDASLKKIVSDFLATFQAQ-