DPOGS210506 | ||
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Transcript | DPOGS210506-TA | 1065 bp |
Protein | DPOGS210506-PA | 354 aa |
Genomic position | DPSCF300186 - 7556-9522 | |
RNAseq coverage | 1232x (Rank: top 10%) |
Annotation | ||||
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Heliconius | HMEL009243 | 0.0 | 86.76% |   |
Bombyx | BGIBMGA012592-TA | 5e-176 | 82.39% |   |
Drosophila | Gbeta5-PA | 5e-150 | 69.01% |   |
EBI UniRef50 | UniRef50_O14775 | 4e-132 | 64.35% | Guanine nucleotide-binding protein subunit beta-5 n=137 Tax=Opisthokonta RepID=GBB5_HUMAN |
NCBI RefSeq | XP_975542.1 | 8e-151 | 68.95% | PREDICTED: similar to guanine nucleotide-binding protein beta 5 (g protein beta5) [Tribolium castaneum] |
NCBI nr blastp | gi|91087273 | 2e-149 | 68.95% | PREDICTED: similar to guanine nucleotide-binding protein beta 5 (g protein beta5) [Tribolium castaneum] |
NCBI nr blastx | gi|91087273 | 1e-144 | 68.95% | PREDICTED: similar to guanine nucleotide-binding protein beta 5 (g protein beta5) [Tribolium castaneum] |
Group | ||||
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Gene Ontology | GO:0005515 | 2.5e-80 | protein binding | |
KEGG pathway | tca:664443 | 2e-150 |   | |
  | K04539 (GNB5) | maps-> | Chemokine signaling pathway | |
InterPro domain | [3-354] IPR016346 | 9.7e-193 | Guanine nucleotide-binding protein, beta subunit | |
[13-354] IPR011046 | 2.5e-80 | WD40 repeat-like-containing domain | ||
[35-353] IPR015943 | 3.8e-76 | WD40/YVTN repeat-like-containing domain | ||
[62-78] IPR001632 | 4.7e-21 | G-protein, beta subunit | ||
[55-94] IPR001680 | 1.5e-10 | WD40 repeat | ||
[319-353] IPR019781 | 2.5e-10 | WD40 repeat, subgroup | ||
[81-95] IPR020472 | 4.6e-07 | G-protein beta WD-40 repeat | ||
Orthology group | MCL12290 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS210506-TA
ATGGCGGCAGACACGGCGGTGGCCCCCAGCCCCGAGGAGACTCTTGAGTCTCTGCTACGAGAGGTGGAGGCGTTGAAACAGAAGCTTGAAGAGGAACGCCAGAAATTAAACGACGCTTCTTTGTCATTTGTGGCTGAAAGATTGGAAACTATAAACTTTCCCACACTAAAGTTGAGGCGTATGCTCAAGGGCCACCAAGCCAAAGTCCTCTGTGCTGACTGGTCTCCTGACAAAAGACACATTGTGTCTTCTTCACAGGATGGGAAGCTGATAATTTGGGACGCATTCACCGCCACCAAGGAGCTCACTATCCCGATGCCCAGCACGTGGGTGATGGCGTGCGCGTACGCTCCCTCGGGCAACATGGTCGCCGCGGGGGGTCTCGACAACAAGGTGACCGTGTTCCCGCTGGGAGGCGAGGAGGAGCCCGCCGCGCGCAAGCGCACGGTGGCCACACACACGTCCTACATGTCGGCCTGTCTGTTCCCGAACACCGACCGCCAGCTTCTCACGGCCAGCGGTGACGGCACCTGCGCGCTCTGGGACGTAGAGTCCGGCCAGCTGCTGCAGAGCTTCCAGGCGCACGCCGCCGATGTGATGGCGCTGGACCTCGCGCCCACGGATATGGGAGACGCCTTCGTTTCGGGGGGCTGCGACCGCGCCGTGCTCGTGTGGGACATGCGTTCCGGCCACGCCGTGCAGGCCTTCGACACGCACCTTTCAGACGTAAACAGCGTGCGCTACCACCCGTCCGGGGACTCGGTGGCTTCCGGCTCTGACGACTCCTCGTGTCGTCTTTTCGACCTGCGCGCTGACCGCGAGGTGGCTCGCTACGCCAAGGACAGTCTGCTGTTCGGAGTCAACTCTGTGGACTGGTCTGTTAGCGGACGGCTTCTGTTCGCGGGCTGCAGCGACTACACGGCCAGCGCCTGGGACGCTTTGCGGGCGGTGCGTGTCGGTACCCTGACTGGTCACGAGCATCGCGTCACCCGCGTAGCGCTGTCTCCGGACGGCACGGCGCTGGCCACGGCCTCGTGGGACGCCACGGTTCGCCTGTGGGCCTGA
>DPOGS210506-PA
MAADTAVAPSPEETLESLLREVEALKQKLEEERQKLNDASLSFVAERLETINFPTLKLRRMLKGHQAKVLCADWSPDKRHIVSSSQDGKLIIWDAFTATKELTIPMPSTWVMACAYAPSGNMVAAGGLDNKVTVFPLGGEEEPAARKRTVATHTSYMSACLFPNTDRQLLTASGDGTCALWDVESGQLLQSFQAHAADVMALDLAPTDMGDAFVSGGCDRAVLVWDMRSGHAVQAFDTHLSDVNSVRYHPSGDSVASGSDDSSCRLFDLRADREVARYAKDSLLFGVNSVDWSVSGRLLFAGCSDYTASAWDALRAVRVGTLTGHEHRVTRVALSPDGTALATASWDATVRLWA-