DPOGS210524 | ||
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Transcript | DPOGS210524-TA | 585 bp |
Protein | DPOGS210524-PA | 194 aa |
Genomic position | DPSCF300186 + 255588-256838 | |
RNAseq coverage | 14424x (Rank: top 1%) |
Annotation | ||||
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Heliconius | HMEL016341 | 2e-101 | 99.45% |   |
Bombyx | BGIBMGA012626-TA | 5e-108 | 98.97% |   |
Drosophila | RpS9-PD | 1e-93 | 90.71% |   |
EBI UniRef50 | UniRef50_P55935 | 2e-91 | 90.71% | 40S ribosomal protein S9 n=131 Tax=root RepID=RS9_DROME |
NCBI RefSeq | NP_001037265.1 | 1e-106 | 98.97% | ribosomal protein S9 [Bombyx mori] |
NCBI nr blastp | gi|315115339 | 7e-106 | 99.48% | ribosomal protein S9 [Euphydryas aurinia] |
NCBI nr blastx | gi|315115339 | 1e-104 | 99.48% | ribosomal protein S9 [Euphydryas aurinia] |
Group | ||||
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Gene Ontology | GO:0006412 | 1.4e-69 | translation | |
GO:0003735 | 1.4e-69 | structural constituent of ribosome | ||
GO:0015935 | 1.4e-69 | small ribosomal subunit | ||
GO:0005622 | 1.5e-29 | intracellular | ||
GO:0019843 | 1.5e-29 | rRNA binding | ||
GO:0003723 | 1.5e-12 | RNA binding | ||
KEGG pathway | ame:409202 | 3e-97 |   | |
  | K02997 (RP-S9e, RPS9) | maps-> | Ribosome | |
InterPro domain | [1-194] IPR022801 | 5.3e-123 | Ribosomal protein S4/S9 | |
[11-166] IPR005710 | 1.4e-69 | Ribosomal protein S4/S9, eukaryotic/archaeal | ||
[9-108] IPR001912 | 1.5e-29 | Ribosomal protein S4/S9, N-terminal | ||
[109-152] IPR002942 | 1.5e-12 | RNA-binding S4 | ||
Orthology group | MCL13338 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS210524-TA
ATGGTGAACAACCGTGTGCCGTCGGTCTTTTCGAAGACGTACGTTACTCCGCGTCGTCCGTTCGAGAAAGCGCGTCTCGATCAGGAGTTGAAGATCATCGGTGAATATGGTCTCCGCAACAAGCGTGAGGTGTGGAGGGTCAAGTACACGCTCGCCCGCATCCGTAAGGCTGCCCGTGAGCTTCTCACCCTGGAGGAGAAGGACCCCAAGCGTCTGTTTGAAGGTAACGCACTCCTCCGTCGTCTGGTGAGGATCGGTGTATTGGATGAGAAGCAGATGAAGCTGGATTACGTCCTGGGTCTCAAGATCGAGGACTTCTTGGAGCGTCGTCTCCAGACCCAAGTGTTCAAAGCCGGTCTGGCCAAGTCCATCCATCACGCTAGAATTCTCATCCGTCAAAGACACATCCGTGTCCGTAAACAAATAGTGAACATCCCATCGTTCATTGTCCGTCTGGACTCTGGCAAGCACATTGACTTCTCTCTGAAGTCACCATTCGGTGGCGGCAGACCTGGTCGTGTCAAGAGGAAGAACCTCCGCAAGGGTCAAGGCGGAGGAGCCACCAATGACGAGGAAGAGGACTAG
>DPOGS210524-PA
MVNNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQIVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQGGGATNDEEED-