| DPOGS210524 | ||
|---|---|---|
| Transcript | DPOGS210524-TA | 585 bp |
| Protein | DPOGS210524-PA | 194 aa |
| Genomic position | DPSCF300186 + 255588-256838 | |
| RNAseq coverage | 14424x (Rank: top 1%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL016341 | 2e-101 | 99.45% | |
| Bombyx | BGIBMGA012626-TA | 5e-108 | 98.97% | |
| Drosophila | RpS9-PD | 1e-93 | 90.71% | |
| EBI UniRef50 | UniRef50_P55935 | 2e-91 | 90.71% | 40S ribosomal protein S9 n=131 Tax=root RepID=RS9_DROME |
| NCBI RefSeq | NP_001037265.1 | 1e-106 | 98.97% | ribosomal protein S9 [Bombyx mori] |
| NCBI nr blastp | gi|315115339 | 7e-106 | 99.48% | ribosomal protein S9 [Euphydryas aurinia] |
| NCBI nr blastx | gi|315115339 | 1e-104 | 99.48% | ribosomal protein S9 [Euphydryas aurinia] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0006412 | 1.4e-69 | translation | |
| GO:0003735 | 1.4e-69 | structural constituent of ribosome | ||
| GO:0015935 | 1.4e-69 | small ribosomal subunit | ||
| GO:0005622 | 1.5e-29 | intracellular | ||
| GO:0019843 | 1.5e-29 | rRNA binding | ||
| GO:0003723 | 1.5e-12 | RNA binding | ||
| KEGG pathway | ame:409202 | 3e-97 | ||
| K02997 (RP-S9e, RPS9) | maps-> | Ribosome | ||
| InterPro domain | [1-194] IPR022801 | 5.3e-123 | Ribosomal protein S4/S9 | |
| [11-166] IPR005710 | 1.4e-69 | Ribosomal protein S4/S9, eukaryotic/archaeal | ||
| [9-108] IPR001912 | 1.5e-29 | Ribosomal protein S4/S9, N-terminal | ||
| [109-152] IPR002942 | 1.5e-12 | RNA-binding S4 | ||
| Orthology group | MCL13338 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS210524-TA
ATGGTGAACAACCGTGTGCCGTCGGTCTTTTCGAAGACGTACGTTACTCCGCGTCGTCCGTTCGAGAAAGCGCGTCTCGATCAGGAGTTGAAGATCATCGGTGAATATGGTCTCCGCAACAAGCGTGAGGTGTGGAGGGTCAAGTACACGCTCGCCCGCATCCGTAAGGCTGCCCGTGAGCTTCTCACCCTGGAGGAGAAGGACCCCAAGCGTCTGTTTGAAGGTAACGCACTCCTCCGTCGTCTGGTGAGGATCGGTGTATTGGATGAGAAGCAGATGAAGCTGGATTACGTCCTGGGTCTCAAGATCGAGGACTTCTTGGAGCGTCGTCTCCAGACCCAAGTGTTCAAAGCCGGTCTGGCCAAGTCCATCCATCACGCTAGAATTCTCATCCGTCAAAGACACATCCGTGTCCGTAAACAAATAGTGAACATCCCATCGTTCATTGTCCGTCTGGACTCTGGCAAGCACATTGACTTCTCTCTGAAGTCACCATTCGGTGGCGGCAGACCTGGTCGTGTCAAGAGGAAGAACCTCCGCAAGGGTCAAGGCGGAGGAGCCACCAATGACGAGGAAGAGGACTAG
>DPOGS210524-PA
MVNNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQIVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQGGGATNDEEED-