DPOGS210567 | ||
---|---|---|
Transcript | DPOGS210567-TA | 654 bp |
Protein | DPOGS210567-PA | 217 aa |
Genomic position | DPSCF300971 - 349-1923 | |
RNAseq coverage | 2370x (Rank: top 5%) |
Annotation | ||||
---|---|---|---|---|
Heliconius | HMEL004323 | 1e-121 | 95.85% |   |
Bombyx | BGIBMGA007971-TA | 3e-107 | 90.57% |   |
Drosophila | Sec22-PA | 5e-86 | 67.74% |   |
EBI UniRef50 | UniRef50_Q7ZV15 | 3e-64 | 53.88% | Vesicle-trafficking protein SEC22b-A n=9 Tax=Opisthokonta RepID=S22BA_DANRE |
NCBI RefSeq | XP_975087.1 | 2e-95 | 76.04% | PREDICTED: similar to snare protein sec22 [Tribolium castaneum] |
NCBI nr blastp | gi|91080669 | 3e-94 | 76.04% | PREDICTED: similar to snare protein sec22 [Tribolium castaneum] |
NCBI nr blastx | gi|91080669 | 5e-89 | 76.04% | PREDICTED: similar to snare protein sec22 [Tribolium castaneum] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0016021 | 9.1e-51 | integral to membrane | |
GO:0016192 | 9.1e-51 | vesicle-mediated transport | ||
GO:0006810 | 1.3e-42 | transport | ||
KEGG pathway | tca:663969 | 6e-95 |   | |
  | K08517 (SEC22) | maps-> | SNARE interactions in vesicular transport | |
  |   |   | Phagosome | |
InterPro domain | [1-126] IPR010908 | 9.1e-51 | Longin | |
[1-127] IPR011012 | 1.3e-42 | Longin-like | ||
[143-216] IPR001388 | 1.5e-15 | Synaptobrevin | ||
Orthology group | MCL15876 |   | Multiple-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
---|
>DPOGS210567-TA
ATGGTGTTAATGACGATGATCGCCCGTGTTGTAGACGGACTCCCTCTAGCCGCTACTATGCAGGAGGACGAACAGAGCGGCTGTAATATATTGGAGTATCAAAACCAAGCAAAAATGCTGTTTAGAAAACTTAGCCCTCAATCACCAATCCGCTGCTCCATTGAAACTGGGCCTTACCTCTTTCATTATCTAATTGAGAACGAAATTTGCTATTTAGTGCTGTGTGAGAGAAATTACAGCAAACGACTTGCCTTCAGTTACTTAGAAGAAATAGCACAGGAGTTCTACCAACAGTACGGGAAAAGAGTTAACACGGTGACTCGTCCTTACACATTCATAGAGTTCGACACGTGGATGCAGCGCGCACGGAAGCAATATGCGGAAGGAGGGGCGAGGGCCCGGCGGGGAGGCGCGGCTGCCGCCCTGGGGGGGCAGCTGGGGGATGTGCAACGGATCATGATGCAGAACATTGATGATGTACTGCAGAGAGGAGCCATACTTTCTGAACTCGATACCAAGACACAGAAGCTGTCGATGATGACACAGAAGTACAAGAAGGACGCCACTTACTTGAACACCAAGTCAATGTTGGTGAAGGCCACGGCAGGTGCTGTGATCTTGCTGGTGGTCGTGCTATATTTCTGGGTGCTTTGA
>DPOGS210567-PA
MVLMTMIARVVDGLPLAATMQEDEQSGCNILEYQNQAKMLFRKLSPQSPIRCSIETGPYLFHYLIENEICYLVLCERNYSKRLAFSYLEEIAQEFYQQYGKRVNTVTRPYTFIEFDTWMQRARKQYAEGGARARRGGAAAALGGQLGDVQRIMMQNIDDVLQRGAILSELDTKTQKLSMMTQKYKKDATYLNTKSMLVKATAGAVILLVVVLYFWVL-