| DPOGS210596 | ||
|---|---|---|
| Transcript | DPOGS210596-TA | 498 bp |
| Protein | DPOGS210596-PA | 165 aa |
| Genomic position | DPSCF300168 - 302920-303417 | |
| RNAseq coverage | 264x (Rank: top 40%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL003091 | 7e-84 | 85.45% | |
| Bombyx | BGIBMGA013545-TA | 3e-80 | 83.12% | |
| Drosophila | l(2)efl-PA | 1e-09 | 33.91% | |
| EBI UniRef50 | UniRef50_D2J4T8 | 3e-77 | 82.50% | 19.5 kDa heat shock protein n=2 Tax=Obtectomera RepID=D2J4T8_BOMMO |
| NCBI RefSeq | NP_001164470.1 | 6e-78 | 82.50% | 19.5 kDa heat shock protein [Bombyx mori] |
| NCBI nr blastp | gi|283483979 | 9e-77 | 82.50% | 19.5 kDa heat shock protein [Bombyx mori] |
| NCBI nr blastx | gi|283483979 | 2e-76 | 82.50% | 19.5 kDa heat shock protein [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| KEGG pathway | bfo:BRAFLDRAFT_130908 | 1e-10 | ||
| K09542 (CRYAB) | maps-> | Protein processing in endoplasmic reticulum | ||
| InterPro domain | [66-157] IPR002068 | 2.3e-17 | Heat shock protein Hsp20 | |
| [52-157] IPR008978 | 4.6e-17 | HSP20-like chaperone | ||
| Orthology group | MCL26086 | Lepidoptera specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS210596-TA
ATGTCCCTGATGCCGTATTGGTTGCGACATATGAGAAATCTAGCGTATCGGGACCCGGTCACGAGGATCCTCGAAGACCCGTTTGCAGTTTTCGCGAGGGACCCTTTCTTCAGATACCCGGCTAAATACATCAGGCAAGTCACAGCGCCTTTGGAATCGGAACATGCTATTGAAGGGATCTACTCTGATGCCGAGTTAAAGGTCGACGGTAAGAAGGTGGAAGTTCACCTGGACGTTCAGAACTTTACACCGGAACAGATCCAGGTGAAGACAGTCGGTAATGAGATCACGGTCGAGGGGAAGAAGGAGATTAAGCGAGAAGATGGGTGGACTAAGAGTCACTTCGAACGACGTTTTCTATTACCCGAAGGTTTCCCGCCGGAGAGAGTGGAGTGTCATTTGGATAAAGGGAAGCTGAAGTTGGTGGCGTTCAGGGCGGAGCCTCTGACGGAAAGAAAGATACCAATTCAAGACAAGTCTGACAGTGATAAGAGCTAG
>DPOGS210596-PA
MSLMPYWLRHMRNLAYRDPVTRILEDPFAVFARDPFFRYPAKYIRQVTAPLESEHAIEGIYSDAELKVDGKKVEVHLDVQNFTPEQIQVKTVGNEITVEGKKEIKREDGWTKSHFERRFLLPEGFPPERVECHLDKGKLKLVAFRAEPLTERKIPIQDKSDSDKS-