Monarch geneset OGS2.0

DPOGS210643
TranscriptDPOGS210643-TA1254 bp
ProteinDPOGS210643-PA417 aa
Genomic positionDPSCF300401 - 116554-122716
RNAseq coverage19911x (Rank: top 0%)
Annotation
HeliconiusHMEL0107900.088.14% 
BombyxBGIBMGA001800-TA0.083.25% 
DrosophilaRpL4-PA1e-15669.87% 
EBI UniRef50UniRef50_P365783e-12663.82%60S ribosomal protein L4 n=128 Tax=Eukaryota RepID=RL4_HUMAN
NCBI RefSeqNP_001037129.12e-17983.25%ribosomal protein L4 [Bombyx mori]
NCBI nr blastpgi|3423564350.088.14%ribosomal protein L4 [Heliconius melpomene cythera]
NCBI nr blastxgi|3423564350.085.89%ribosomal protein L4 [Heliconius melpomene cythera]
Group
Gene OntologyGO:00058404.4e-113ribosome
GO:00064124.4e-113translation
GO:00037354.4e-113structural constituent of ribosome
KEGG pathwaynvi:1001145854e-165 
 K02930 (RP-L4e, RPL4)maps-> Ribosome
InterPro domain[9-264] IPR0235744.4e-113Ribosomal protein L4 domain
[26-264] IPR0021361.4e-46Ribosomal protein L4/L1e
Orthology groupMCL14297 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS210643-TA
ATGAGTCTATCGGTAGCCCGGCCGTTAGTGTCGGTGTACACAGAGAAGAGTGAGAAGGTAGCAGACGCAAACATCCCTCTGCCGTTTGTTTTCAAGGCCCCGATCCGACCGGACCTTGTCAACGATGTTCATGTGTCTATGAGCAAGAATTCTAGGCAACCCTACAGTGTGAGCAAGGAAGCCGGTCATCAAACCAGTGCGGAGTCATGGGGAACAGGTCGCGCCGTCGCCCGTATACCCCGTGTCCGCGGCGGTGGTACTCATAGGTCCGGCCAGGGTGCCTTCGGCAACATGTGTCGTGGCGGCCGTATGTTCGCGCCGACCAAGCCCTGGCGCCGTTGGCACCGTCGCGTCAATCTCCGCCAGCGACGGGCTGCAGCGGCCGCAGCTGTTGCCGCGGCTGGTGTCCCAGCACTGGTTCAGGCCAGAGGTCACATCATTGAGAAAGTGCCAGAATTCCCGCTCGTAGTGGCAGATTCTGTCCAAGCCATTGAGAAGACAAAACAGGCTGTTATCTTCCTAAGAAGAGTAAAGGCTTGGTCCGATGTGCTCAAGGTATACAAATCTCAACGTCTCCGTGCCGGCAAGGGGAAGATGCGCAACCGACGCAAACTGCAAAGAAAAGGACCTCTGATCGTTTACCACAAGGACCAAGGTCTATCCAAAGCTTTCCGTAACATCCCCGGAGTGGAGACCATCAGTGTCAACAAACTGAACCTGCTGAAGCTGGCTCCGGGAGGTCACATTGGACGCTTCATCATCTGGACTAAGAGCGCCTTCGAGAGGCTCGACCCACTGTTTGGTTCCTGGAAGACACCATCCAAGCTTAAGAAGGGCTTCAACCTGCCGCAGCCCAAGATGGCCAACACCGACCTGTCCCGCTTGCTCAAGTGCGACGAGATCAGGAAGGTGCTGCGCGCTCCCAACAAGCGGGTCGTCCGAGCTCCTCGCAAGCTGAACCCTCTCAGCAATGCTCGCGCTATGCTGAGACTCAATCCCTATGCGGCCGTTCTCAAGAGGAAGGCCGTCTTGGACCAGAACAAACGCAACGATGCCAGGGCTCTGGCTCTGGCCGAGAAGAGAGGGATCTCCCTCCCATCCTCGGACCCGGCGGTGAGGGCTCGGCGTCTCCGCGAGAGGAGGGCCAAGAGTCTGAAGCTGGCGGCCGCCAAGGCCCCCAAGAAGAAGGTGGAGAAGAAGACGCCCCCCCCGCCCAAGAAGAAGGCGGACAAGAAGGAGAAGGCCAAGAAGTGA

Protein sequence:

>DPOGS210643-PA
MSLSVARPLVSVYTEKSEKVADANIPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYSVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQRRAAAAAAVAAAGVPALVQARGHIIEKVPEFPLVVADSVQAIEKTKQAVIFLRRVKAWSDVLKVYKSQRLRAGKGKMRNRRKLQRKGPLIVYHKDQGLSKAFRNIPGVETISVNKLNLLKLAPGGHIGRFIIWTKSAFERLDPLFGSWKTPSKLKKGFNLPQPKMANTDLSRLLKCDEIRKVLRAPNKRVVRAPRKLNPLSNARAMLRLNPYAAVLKRKAVLDQNKRNDARALALAEKRGISLPSSDPAVRARRLRERRAKSLKLAAAKAPKKKVEKKTPPPPKKKADKKEKAKK-