MonarchBase - Protein-coding gene

DPOGS210743
Transcript	DPOGS210743-TA	4428 bp
Protein	DPOGS210743-PA	1475 aa
Genomic position	DPSCF300013 + 349799-359455
RNAseq coverage	69x (Rank: top 66%)

Annotation
*Heliconius*	HMEL021773	0.0	72.78%
*Bombyx*	BGIBMGA006274-TA	0.0	72.80%
*Drosophila*	Cg25C-PB	4e-112	36.77%
EBI UniRef50	UniRef50_UPI0002062AE2	0.0	54.92%	UPI0002062AE2 related cluster n=1 Tax=unknown RepID=UPI0002062AE2
NCBI RefSeq	XP_002428942.1	0.0	59.13%	collagen alpha-2 precursor, putative [Pediculus humanus corporis]
NCBI nr blastp	gi\|242016919	0.0	59.13%	collagen alpha-2 precursor, putative [Pediculus humanus corporis]
NCBI nr blastx	gi\|242016919	0.0	59.12%	collagen alpha-2 precursor, putative [Pediculus humanus corporis]

Group
Gene Ontology	GO:0005201	2e-70	extracellular matrix structural constituent
	GO:0005581	2e-70	collagen
KEGG pathway	phu:Phum_PHUM411770	0.0
	K06236 (COL1AS)	maps->	Amoebiasis
			Focal adhesion
			ECM-receptor interaction
InterPro domain	[1253-1475] IPR000885	2e-70	Fibrillar collagen, C-terminal
	[249-307] IPR008160	2.6e-10	Collagen triple helix repeat
Orthology group	MCL10767		Patchy

Nucleotide sequence:

>DPOGS210743-TA
ATGTGGCAAGTGTCAGTAGTGTGGCTGGCGGTGCTGGCGCTGCCAGTGGCTTGCAAGGACCTGGTAGAGGTCCGAGAGGAACTGCCCCAAGCTCAAGAACCAGATCTCGTGAATTATGATGATTATAATCCGTTTGGAGAAGATGAAAACGCTATACTTGCAGAAAGAGACTTCACTCAATCGACCACTGCGCAATCCACCAGATGTTTCGACATAGGACGCTCGTTCTCTGAAGGGGAAACCTGGAAACGAGACAACTGCACGCTCTGTCAGTGTTATAACACTCGTGTCAATTGCTCTGTGCTGCCATCTTGTCTTTTAAGCCCGGGCACGATCCGTCCAACACCATTGGTACCGCCGCAATCTCCACCGGTTCGTGGCATGGCTGGGGAGGCTGGGGCCGACGGACCCCCCGGACCTCCAGGGACCCCTGGCGTTAATGGAGTCCCTGGAGCACCTGGCATTCCAGGACCGGTCGGACCAATGCCTGATGTAAACGCCTACCTGGCTCAGTTAGCAGCTGCCGCCGGTGGTGACAAAGGTCCTGCCTTCGATCCATATCACTACATGCAAGCACCTGTGGGAGTTCCAGGGGTTAGGGGAATTCCAGGGCCCCAGGGTCCTCCGGGACCTCAAGGATTTCAAGGCCCCCGAGGTGAACCCGGTGAGCCTGGATTGCCTGGTCCACCAGGAGTTGCTGGTGAGAGAGGTCCTCAAGGGCTACCCGGAAAAGATGGATCACCGGGAGAAGATGGGGAGCCTGGTCCAGCCGGTGCTATCGGCCAGCCAGGCCAGAGAGGAAGCCCTGGTATACCTGGTATTCAAGGATTGAAGGGACATCGTGGCTTTGACGGCAAGGACGGTGCTAAGGGCGAACAAGGTTTGCCTGGAGAAAAGGGCCCTACTGGCCTCCCTGGACCTATGGGCCCAAATGGACCCGCGGGTCCTGTCGGACCGAGAGGCGAAAGGGGCCGTGAAGGCCCTGCTGGAGTTCCGGGTATAAGAGGAGTTGACGGAGCTCCAGGATCACCGGGACTAATGGGTAATATTGGAAAGCCTGGCGCACCTGGTTTTCCTGGATCCCCCGGCTTGAAGGGCGAACAAGGAGCAGTCGGCCCAAAAGGCAGCCAAGGAATGCAAGGTCCACGAGGGGAGCCAGGACGTAATGGACAGTCAGGGGAAGTGGGTCCCCCGGGTCTAGCTGGTAGAGATGGCACACCGGGAGAAAAAGGGGTACAAGGACAAACAGGCGCCGCCGGACCTCAAGGATTTCCGGGACCTCGTGGTACGCCTGGAGTTGCCGGTGATCCTGGGTTGCCAGGGACGAAGGGAATGCCAGGCCAGCCGGGGGATAGAGGACCTAAGGGTGAAATTGGCTTAAGAGGTGAAATTGGCGCACCAGGTCCGCGTGGTATGCCAGGTGGCATTGGACCTGAGGGTAAAAGGGGAAAAAGAGGTTTGAGAGGACCACCGGGAAACTTAGGACCGCAAGGAGATAGAGGGTTACAAGGATTAAGAGGTTTGAATGGCGCTGACGGTCCAATGGGTCCAAAAGGTCAAACCGGGGAAAGAGGCGCTGTTGGTCTCCCAGGTCCAAAAGGCAGTACCGGCGATATTGGCAGACCTGGACCTCAAGGACTTCTCGGCCCCAGAGGGTTTATGGGCAGACCAGGCATTCCAGGTAAATCTGGTCAACCTGGCGAAAGAGGTATACCTGGTGCAGATGGTAGGCCTGGTGAACAGGGACTTCAAGGACTTCAAGGTCCACCTGGCTTAATTGGAAGTCCTGGCGAACGTGGATTGCAGGGTGAACATGGTAAAGATGGAGATGTTGGTCAACCTGGAGCACCTGGTGCTAAAGGAGACGCCGGAAGAGATGGAAGTCCAGGGAGTCAAGGACCGCAAGGCCCCGTTGGTGCAACTGGGGAACGCGGTCCCATAGGGCCTGCTGGACCGACTGGTTTTCCTGGTTTACCTGGAGCACCAGGATCACCAGGTCCTGCAGGTAAAGACGGAGAACCAGGTGTGTCTGGACCTGCCGGACCACCAGGAGCTACAGGACAAAGAGGTGAAAGAGGTTTCTCAGGAGAAAGAGGCAGTCCAGGTCTACCAGGTGTTGCAGGAGAAAAGGGTGAAGCAGGTGCTCAGGGTCTTGATGGTCCACCGGGTGCGGAAGGACCTCGTGGAAGTAAGGGACATCCAGGACCAATGGGCACGATGGGATTACCAGGACTACGTGGTATGTCCGGTTTGCCAGGTGAAAAGGGGGAGAGAGGATCTTCAGGACCACAGGGGCCAGAGGGACCAGCGGGTCGCCAAGGAGAGCAAGGACCTCAAGGTCCTATAGGTCCTGCTGGACCACCTGGAGAGCCGGCCGAAAGAGGTGAACCTGGAACACCAGGGATGCCAGGAGAATCAGGGGCACCGGGGTCTACAGGAGAGCGGGGTCACCCTGGTCCTCAGGGCAATAATGGTTTACCTGGTCCTCCAGGATTAACAGGCATGCCCGGCTTGAAAGGGGATAGAGGCTATGCAGGACCCAAAGGTCAACAAGGAGCTCAAGGAAGTCCAGGGATTTCTGGTGAACCGGGGCAACGAGGGCTTCCAGGGCAACCTGGAGCTAAGGGTGCTCATGGAGAGCAAGGACATAAAGGTGAAATTGGACGTGCTGGCTTACCGGGAAGACCAGGGGACATGGGGCCGCAGGGTCCTCAAGGAAGCCCGGGTCCTACTGGGGCTCCTGGGTTACCAGGTGCCAAAGGGTCGACTGGAGATACTGGACGGTCCGGACCACCTGGACCTCAAGGGTTAATTGGACCACAAGGACCAGAAGGTCCTAAAGGCGAAAGAGGTGCTGAAGGAGAAACTGGGCCACAGGGACAGCAGGGTATCCCTGGACAAGCTGGAGAAAGAGGACCAAGTGGATTACCAGGTTTAACTGGGGCACCAGGACCACAAGGTCTGAGAGGAGTGCAGGGAGAAAGTGGAGTTCCGGGAAAACCAGGAGCAGACGGTGCCCCAGGTCCTATAGGCGCTCCTGGACCACAAGGGATGACTGGTCCAATGGGGGAACCTGGACCAGAAGGTCGTCCGGGCAAGCTGGGTCAGCCTGGTATTCCAGGACGGCAGGGTGAAAAAGGTCCTATGGGACAACCAGGACAACCAGGTCCACCAGGTTCTCCAGGCGTGCAGGGACCTCCAGGTTCCTCCGGACCTCCTGGAGCAACTGGAGAAAGAGGACCTAGAGGAGAAAGTGGTTCTCCTGGCATAGAAGGGCCTCAAGGTCCATCTGGCAAGCAGGGCCCGCCTGGTATGGATGGTATTAAGGGTGAGCGAGGAGAAAACGGCGCTGATGGACCTAAAGGTCACGCGGGATTGCCAGGACTCCCGGGTTTGATAGGTACTCCAGGAAGACAAGGTGACAGAGGTTTACCAGGTGCCATAGGACCGCCAGGAAAGGATGGAGACGCTGGACCAAGAGGACCACCTGGCCGTGATGGTAGTCCGGGTCCCCAAGGGCCATTAGGTCCCCCGGGAGGTCGTGGTCCTCCAGGAGAGCCTGGACGTCATGGAACACCTGGACCCGCTGGACCTCCTGGACCACCAGGACCTCCTGGAGAAGGGTTGGCATATGATGCTGCTGCAATTGCTGCTATGCTTCAACAAGGAACGATGAAAGGTCCAGATCCGATGGGAGATGATCCGAACATAATGCCACCAAGGTTCTTCAAAGAAGATATGTCCCCAGAAGAGAGGAAAAGTATTGTAATGAAAGCGTACGAAAGACTCCAGGTTTCTCTGGACAAATTCTTAAAACCTGATGGCTCTAAGGAAGCACCCGCCAAGACATGTGGGGATATCAAATACCATCATCCTCATTTCGAAAGTGGTCAGTACTGGATAGATCCCAACGGTGGTGATATCAAGGATGCGATCTTGGTGCACTGCGATTTAAGTACTGGCGCTAGCTGTGTATTTCCGAAGCCCATGATGTCGGAGGAACTCGTCCACTCCGAAAGAAACGAGGCGTGGTTAAGTGAGATGGATAACGGGTTCGCTATATCTTACAAAGCGGAGCACAGTCAGCTGACTTACCTACAACTGCTATCAGTGAAAGCGGTACAGAATGTCACACTTCATTGTCGAAATATTGTTGGCTACTATGACCCAGCCACTAGGAACTACAAACATGGCCTGAAACTACTGGCTTATAATGATGCCGAGATTCTTCCTAAGGCCAATAACAGACTGCGATATAAGGCTTTAATAGATGAATGTCAGTTTAAATCTCAAGATTGGTCCAAGACGATAGTCCAGTATGAGACGGACAAGCCTGGGCGGTTGCCAGTTCTGGATGTGGCTGTAAGAGACCTGCCCAGAACCGACCAGGCCTTCAGGATTGAACTGGGACTGGCGTGCTTTACTTAA

Protein sequence:

>DPOGS210743-PA
MWQVSVVWLAVLALPVACKDLVEVREELPQAQEPDLVNYDDYNPFGEDENAILAERDFTQSTTAQSTRCFDIGRSFSEGETWKRDNCTLCQCYNTRVNCSVLPSCLLSPGTIRPTPLVPPQSPPVRGMAGEAGADGPPGPPGTPGVNGVPGAPGIPGPVGPMPDVNAYLAQLAAAAGGDKGPAFDPYHYMQAPVGVPGVRGIPGPQGPPGPQGFQGPRGEPGEPGLPGPPGVAGERGPQGLPGKDGSPGEDGEPGPAGAIGQPGQRGSPGIPGIQGLKGHRGFDGKDGAKGEQGLPGEKGPTGLPGPMGPNGPAGPVGPRGERGREGPAGVPGIRGVDGAPGSPGLMGNIGKPGAPGFPGSPGLKGEQGAVGPKGSQGMQGPRGEPGRNGQSGEVGPPGLAGRDGTPGEKGVQGQTGAAGPQGFPGPRGTPGVAGDPGLPGTKGMPGQPGDRGPKGEIGLRGEIGAPGPRGMPGGIGPEGKRGKRGLRGPPGNLGPQGDRGLQGLRGLNGADGPMGPKGQTGERGAVGLPGPKGSTGDIGRPGPQGLLGPRGFMGRPGIPGKSGQPGERGIPGADGRPGEQGLQGLQGPPGLIGSPGERGLQGEHGKDGDVGQPGAPGAKGDAGRDGSPGSQGPQGPVGATGERGPIGPAGPTGFPGLPGAPGSPGPAGKDGEPGVSGPAGPPGATGQRGERGFSGERGSPGLPGVAGEKGEAGAQGLDGPPGAEGPRGSKGHPGPMGTMGLPGLRGMSGLPGEKGERGSSGPQGPEGPAGRQGEQGPQGPIGPAGPPGEPAERGEPGTPGMPGESGAPGSTGERGHPGPQGNNGLPGPPGLTGMPGLKGDRGYAGPKGQQGAQGSPGISGEPGQRGLPGQPGAKGAHGEQGHKGEIGRAGLPGRPGDMGPQGPQGSPGPTGAPGLPGAKGSTGDTGRSGPPGPQGLIGPQGPEGPKGERGAEGETGPQGQQGIPGQAGERGPSGLPGLTGAPGPQGLRGVQGESGVPGKPGADGAPGPIGAPGPQGMTGPMGEPGPEGRPGKLGQPGIPGRQGEKGPMGQPGQPGPPGSPGVQGPPGSSGPPGATGERGPRGESGSPGIEGPQGPSGKQGPPGMDGIKGERGENGADGPKGHAGLPGLPGLIGTPGRQGDRGLPGAIGPPGKDGDAGPRGPPGRDGSPGPQGPLGPPGGRGPPGEPGRHGTPGPAGPPGPPGPPGEGLAYDAAAIAAMLQQGTMKGPDPMGDDPNIMPPRFFKEDMSPEERKSIVMKAYERLQVSLDKFLKPDGSKEAPAKTCGDIKYHHPHFESGQYWIDPNGGDIKDAILVHCDLSTGASCVFPKPMMSEELVHSERNEAWLSEMDNGFAISYKAEHSQLTYLQLLSVKAVQNVTLHCRNIVGYYDPATRNYKHGLKLLAYNDAEILPKANNRLRYKALIDECQFKSQDWSKTIVQYETDKPGRLPVLDVAVRDLPRTDQAFRIELGLACFT-

Monarch geneset OGS2.0

Nucleotide sequence:

Protein sequence: