Monarch geneset OGS2.0

DPOGS210795
TranscriptDPOGS210795-TA600 bp
ProteinDPOGS210795-PA199 aa
Genomic positionDPSCF300027 - 1133134-1155056
RNAseq coverage2482x (Rank: top 5%)
Annotation
HeliconiusHMEL0077425e-10598.37% 
BombyxBGIBMGA007110-TA1e-9695.95% 
DrosophilaRac1-PA1e-10195.63% 
EBI UniRef50UniRef50_P630002e-9894.02%Ras-related C3 botulinum toxin substrate 1 n=319 Tax=root RepID=RAC1_HUMAN
NCBI RefSeqXP_623951.14e-10296.74%PREDICTED: similar to Ras-related protein Rac1 isoform 1 [Apis mellifera]
NCBI nr blastpgi|665582207e-10196.74%PREDICTED: ras-related protein Rac1 isoform 1 [Apis mellifera]
NCBI nr blastxgi|665582201e-9996.74%PREDICTED: ras-related protein Rac1 isoform 1 [Apis mellifera]
Group
Gene OntologyGO:00072642.2e-139small GTPase mediated signal transduction
GO:00056222.2e-139intracellular
GO:00055252.2e-139GTP binding
GO:00150314.8e-18protein transport
GO:00160201.4e-16membrane
GO:00071651.4e-16signal transduction
GO:00061841.4e-16GTP catabolic process
GO:00039241.4e-16GTPase activity
KEGG pathwayame:5515541e-101 
 K04392 (RAC1)maps-> Axon guidance
    Regulation of actin cytoskeleton
    Fc epsilon RI signaling pathway
    Toll-like receptor signaling pathway
    MAPK signaling pathway
    Fc gamma R-mediated phagocytosis
    B cell receptor signaling pathway
    Pathways in cancer
    Shigellosis
    Chemokine signaling pathway
    Leukocyte transendothelial migration
    Natural killer cell mediated cytotoxicity
    Neurotrophin signaling pathway
    Phagosome
    Focal adhesion
    Colorectal cancer
    Amyotrophic lateral sclerosis (ALS)
    Viral myocarditis
    Bacterial invasion of epithelial cells
    Adherens junction
    Renal cell carcinoma
    Pancreatic cancer
    Wnt signaling pathway
    Epithelial cell signaling in Helicobacter pylori infection
    VEGF signaling pathway
InterPro domain[6-179] IPR0035782.2e-139Small GTPase superfamily, Rho type
[5-177] IPR0018062.6e-55Small GTPase superfamily
[1-139] IPR0052251.2e-38Small GTP-binding protein domain
[4-179] IPR0035794.8e-18Small GTPase superfamily, Rab type
[1-179] IPR0208491.4e-16Small GTPase superfamily, Ras type
Orthology groupMCL11122 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS210795-TA
ATGCAGGCCATAAAGTGTGTCGTCGTTGGTGATGGTGCCGTCGGTAAGACATGTCTGCTCATCAGTTATACTACAAATGCCTTCCCCGGCGAGTACATACCGACAGTATTCGATAATTATTCAGCAAATGTGATGGTCGATGGCAAGCCAATCAACCTCGGGCTTTGGGACACGGCTGGTCAGGAGGACTACGACAGGTTGCGACCCCTGTCCTATCCACAGACGGACGTCTTCCTCATATGCTTCTCACTCGTCAACCCAGCTTCCTTCGAGAACGTTCGCGCTAAGTGGTATCCGGAGGTGAGGCATCATTGTCCCTCGACTCCCATCATCCTGGTTGGAACTAAGCTCGACCTCCGCGAGGACAAGGACACCATAGAGAAGCTCAAGGACAAGAAACTGGCCGCCATCACCTACCCTCAGGGTCTCAGCATGGCTAAGGAGATAGGCGCGGTGAAGTACCTCGAGTGCTCCGCCCTCACGCAGAAGGGTTTGAAGACTGTGTTCGACGAGGCCATCCGAGCTGTGCTCTGTCCGGTGCAGCCCGTCAAGATAGTGTACACACCAGTCGACGCCAGTGTAAACATCAAAGCTATATGA

Protein sequence:

>DPOGS210795-PA
MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLREDKDTIEKLKDKKLAAITYPQGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVQPVKIVYTPVDASVNIKAI-