Monarch geneset OGS2.0

DPOGS210798
TranscriptDPOGS210798-TA2091 bp
ProteinDPOGS210798-PA696 aa
Genomic positionDPSCF300027 - 1083238-1088686
RNAseq coverage3579x (Rank: top 3%)
Annotation
HeliconiusHMEL0141770.088.58% 
BombyxBGIBMGA007114-TA0.091.67% 
DrosophilaeIF3-S9-PB0.058.83% 
EBI UniRef50UniRef50_B0W5620.059.20%Eukaryotic translation initiation factor 3 subunit B n=6 Tax=Culicidae RepID=EIF3B_CULQU
NCBI RefSeqNP_001037602.10.091.67%eukaryotic translation initiation factor 3 subunit B [Bombyx mori]
NCBI nr blastpgi|1129831840.091.67%eukaryotic translation initiation factor 3 subunit B [Bombyx mori]
NCBI nr blastxgi|1129831840.091.67%eukaryotic translation initiation factor 3 subunit B [Bombyx mori]
Group
Gene OntologyGO:00064130translational initiation
GO:00037430translation initiation factor activity
GO:00037230RNA binding
GO:00055151.9e-15protein binding
GO:00001661.9e-08nucleotide binding
GO:00036765.4e-07nucleic acid binding
KEGG pathway 
InterPro domain[6-697] IPR0114000Translation initiation factor eIF-3b
[384-586] IPR0139794.3e-50Translation initiation factor 2A, beta propellor-like domain
[472-556] IPR0159431.9e-15WD40/YVTN repeat-like-containing domain
[81-142] IPR0126771.9e-08Nucleotide-binding, alpha-beta plait
[83-133] IPR0005045.4e-07RNA recognition motif domain
Orthology groupMCL13702 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS210798-TA
ATGGCAAAGAAAAAAGGCGATGAGAAAGTGAATCAAAACCCACAAAGTGATAATGAAGAACAAAACTTTGACGAAGAGCCTAATTTTGACGATCCAGAAGGTTTCGTTGATGACATTACAGACGAGGAGTTGTTAGCGGACCTGTTAGAGAAGAAGCCTAAGGAATCCGACGGCTACGAGAATGTGATCATCGTAGACGGATGCCCGCAGGTCGGGCCAGAGCGTTTAGAGAAACTCCAGAGCGTTATAAACAAGATCTTCAGCAAATTTGGCAAAATTGTCAATGAGTATTACCCGACCACCGAGACCGGAGTAACTACAGGTTACATTTTCCTGGAGTACAGTAATCCACAGAACGCCGCTGAAGCTGTGCAGGCCACAAATAATTGTAAATTAGATAAGCAGCATACATTTTTAGTGAATCTATTTACAGACTTCAAAAAGTATGCTGACATTCCCAAAGAATGGGAACCTCCTTCCCCTCAGCCTTTCAAGGTGCAGTCAGACCTACAATGGTATTTGATGGACCCTGATGCTTACGACCAATTCCTTGTGGGTATTGGAACTGGTGTAGCATTACAAGTATGGCAGAATGCATTGCCTGAACCCGTTGTACTGCAGGAGAGACCTAATTGGACTGAAACTTATGCTGTTTGGTCACCTCTTGGTACATATTTGGCGACTTTCCACTGGCGCGGTGTTGCACTATGGGCGGGTCCTAAATTCAGTCAATTCCAAAAGTTCTATCATCCCGAGGCGAGATTCATTTCATTTTCACCCTGTGAGAACTATATCGTTACCTTCTCACCCAGCGGCGACAGGGGTGACGATAAGAAGTTAATTATATGGGACATAAGAACAGGTCAAGAAAAACGTAGTTTCCCACCTCCGGATGAGTATGTAACCTGGCCGATATTCCGTTGGAGTAAGGATGATAAGTTCTTTGCAAGATTGGGACCGGATATGCTCTCTGTTTATGAGACGCCGAGCTTTGGTCTTCTCGATAAGAAGTCCATTAAGATACCCGGTATACGTGACTTCTGCTGGTCACCATCGGATAACACCCTGGCTTACTGGGTCGCTGAGGACAAAGACGTACCGGCGAGAGTCACTCTGCTAGAACTCCCCAATCGTACGGAGATACGCTCAAAGAATCTGTTTTCCGTCGCCGACTGCAAAATTCACTGGCAGAAGAGCGGCGACTACCTCTGCGTCAAAGTGGATCGCTACTCCAAGGTCAAGAAAGACAAGAACGAGATCAAATACTCCGGCATGTATTACAATTTTGAGATATTCCATATGAGGGAGAAAGAAATACCAGTGGACTCTGTGGAAATCAAGGAACCTATACAGGCGTTCGCGTGGGAGCCCATAGGGGTGAAGTTCTCGATAATTCATGGCGATACAGCGAACACCTGTATAAGCTTCTACCAAGTCAACACCGGCCAGGCTCCTACGTTGCTGAAGAAGTTCGAAAGGACTCCCTTCAATCACCTGTTCTGGTCTCCGATGGGCCAGTTCATTGTACTCGCAAATCTCGGCCTGACAGGAGGTGCCTTGGAATTTTTGGACACCAATGACTTCACAATCATGAATGTCTCCGATCATTATCAGATGTCTGGCATAGAATGGGATCCGACTGGCCGTTATGTGGTCACAGGAGTATCGTCACTCAAATGCAAGATGGACTGCGGATACTATCTGTGGTCATTCCAAGGGAAGATTCTCAGACGAGTGATGAAGGAAGGTTTCGCTCAGTTCCTATGGAGACCTCGTCCCCCGACGCTGCTGTCTGAAAAACAACAAAAAGATATCAAAAAGAACCTCAAGAAATATTACTCTCAGTTTGAATCCAAGGACCGTATGAGGAGTAGCAAAGCCAGCAAGGAGTTAGTTGCTAAACGGACGGAGCAAATGAAAAAACACGTCGAGTATCGTGAACAGAAGACATTGGAGTGGGCTGAGCAGAAGCCGCGTCGGCTCGAATTGAGAAACTATGTCGACACAGACGGTCTCGACACGGACGCGGTTAACTCGGTCGAGGAGGTTGTAGAATTCTTTATTAAAGAGGAACAGACGGTCGTCGAGTAG

Protein sequence:

>DPOGS210798-PA
MAKKKGDEKVNQNPQSDNEEQNFDEEPNFDDPEGFVDDITDEELLADLLEKKPKESDGYENVIIVDGCPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTETGVTTGYIFLEYSNPQNAAEAVQATNNCKLDKQHTFLVNLFTDFKKYADIPKEWEPPSPQPFKVQSDLQWYLMDPDAYDQFLVGIGTGVALQVWQNALPEPVVLQERPNWTETYAVWSPLGTYLATFHWRGVALWAGPKFSQFQKFYHPEARFISFSPCENYIVTFSPSGDRGDDKKLIIWDIRTGQEKRSFPPPDEYVTWPIFRWSKDDKFFARLGPDMLSVYETPSFGLLDKKSIKIPGIRDFCWSPSDNTLAYWVAEDKDVPARVTLLELPNRTEIRSKNLFSVADCKIHWQKSGDYLCVKVDRYSKVKKDKNEIKYSGMYYNFEIFHMREKEIPVDSVEIKEPIQAFAWEPIGVKFSIIHGDTANTCISFYQVNTGQAPTLLKKFERTPFNHLFWSPMGQFIVLANLGLTGGALEFLDTNDFTIMNVSDHYQMSGIEWDPTGRYVVTGVSSLKCKMDCGYYLWSFQGKILRRVMKEGFAQFLWRPRPPTLLSEKQQKDIKKNLKKYYSQFESKDRMRSSKASKELVAKRTEQMKKHVEYREQKTLEWAEQKPRRLELRNYVDTDGLDTDAVNSVEEVVEFFIKEEQTVVE-