| DPOGS210861 | ||
|---|---|---|
| Transcript | DPOGS210861-TA | 468 bp |
| Protein | DPOGS210861-PA | 155 aa |
| Genomic position | DPSCF300027 + 779472-781192 | |
| RNAseq coverage | 40771x (Rank: top 0%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL007829 | 6e-66 | 90.32% | |
| Bombyx | BGIBMGA006986-TA | 4e-59 | 83.23% | |
| Drosophila | RpL22-PA | 1e-30 | 57.46% | |
| EBI UniRef50 | UniRef50_Q4GXF3 | 4e-31 | 54.55% | Ribosomal protein L22e n=12 Tax=root RepID=Q4GXF3_CICCA |
| NCBI RefSeq | NP_001037225.1 | 1e-57 | 83.23% | ribosomal protein L22 [Bombyx mori] |
| NCBI nr blastp | gi|342356465 | 3e-63 | 90.32% | ribosomal protein L22 [Heliconius melpomene cythera] |
| NCBI nr blastx | gi|342356465 | 2e-72 | 90.32% | ribosomal protein L22 [Heliconius melpomene cythera] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005840 | 8.4e-70 | ribosome | |
| GO:0006412 | 8.4e-70 | translation | ||
| GO:0005622 | 8.4e-70 | intracellular | ||
| GO:0003735 | 8.4e-70 | structural constituent of ribosome | ||
| KEGG pathway | dpe:Dper_GL13062 | 6e-36 | ||
| K02891 (RP-L22e, RPL22) | maps-> | Ribosome | ||
| InterPro domain | [1-155] IPR002671 | 8.4e-70 | Ribosomal protein L22e | |
| Orthology group | MCL12388 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS210861-TA
ATGGCAGTTGCGAAGAAACCCGTGGCTAAGAAAGCCCAACTTAACCAAAAGAGTGGTAAAAAAGGCGTCAAGGGTAGCAAAATCCGCGGCAAGGGACAGAGAAGGAAAATCAGTCTTAAGTTTGCCATTGACTGCACGCACCCTGCCGAAGACAGCATCTTGGAAGTAGCCAACTTCGAGAAGTACCTCAAAGAACGTGTTAAGGTTGAGGGAAAAACAAATAACCTAGGCAATCACGTTGTCATCGCGAGGGATAAGACAAAAATTATCATCAATGCAGGCAAGTCTTTATTTACACACTTCAACATTCCCTTCTCCAAGAGGTACCTGAAATACTTGACAAAACGTTACCTCAAGAAGAACAACCTCCGTGACTGGTTGCGAGTGGTTGCTTCGGCTCATGATTCCTACGAGCTCCGTTACTTCAACATCAACGCTGACAGTGACAATGAAGACAATGAGGATTAA
>DPOGS210861-PA
MAVAKKPVAKKAQLNQKSGKKGVKGSKIRGKGQRRKISLKFAIDCTHPAEDSILEVANFEKYLKERVKVEGKTNNLGNHVVIARDKTKIIINAGKSLFTHFNIPFSKRYLKYLTKRYLKKNNLRDWLRVVASAHDSYELRYFNINADSDNEDNED-