Monarch geneset OGS2.0

DPOGS210873
TranscriptDPOGS210873-TA654 bp
ProteinDPOGS210873-PA217 aa
Genomic positionDPSCF300027 + 1313095-1314478
RNAseq coverage532x (Rank: top 24%)
Annotation
HeliconiusHMEL0024392e-11690.78% 
BombyxBGIBMGA006998-TA1e-9178.90% 
DrosophilaCG32202-PA2e-1134.92% 
EBI UniRef50UniRef50_E2AFR09e-4345.63%Non-histone protein 10 n=8 Tax=Endopterygota RepID=E2AFR0_CAMFO
NCBI RefSeqXP_001945537.12e-3739.58%PREDICTED: similar to predicted protein [Acyrthosiphon pisum]
NCBI nr blastpgi|3227790375e-4548.06%hypothetical protein SINV_10681 [Solenopsis invicta]
NCBI nr blastxgi|3227790372e-4647.60%hypothetical protein SINV_10681 [Solenopsis invicta]
Group
Gene OntologyGO:00055154.6e-20protein binding
GO:00036773.5e-19DNA binding
KEGG pathwayisc:IscW_ISCW0173502e-09 
 K10802 (HMGB1)maps-> Base excision repair
InterPro domain[120-213] IPR0090714.6e-20High mobility group, superfamily
[135-215] IPR0009103.5e-19High mobility group, HMG1/HMG2
Orthology groupMCL15059 Insect specific
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS210873-TA
ATGACAGTCCAACAACTGAACTCGAATATTTCTGACGACTCAGATGATATGGTTAGTTTACCATCGGAAGAAGAAATTTATAGACGAAAATATCAGTTGTTGCTGGAGCGATGTGAAGTGTTGCAGCAGGATAATGAACGAATTGTGAATAGGATACATGAAGTCAAGAAAATAACCAAACGATATAAAAAAGATATAAAATTGTTAGTCGAAAGACTAGATAAACATGGAGACCCCTTTAGAACGGCTTCAGTAGAAGTCGAGGTAAAACCAAAAGTTCCGGTACGACCTCCTCGTGTCGGTGCCAAGACACAGACCCAATCAAAACAGGTTGACAAACAAAATGCCAGTGGAGGAAAAAAACCAGCACCAAAAAGGAAAAGTAAAGCAGATAAGCCTGAAAGAGATCCAAACGCACCGAAGAAGCCATGCAATGCATTTTTCCAGTTTTGTCAGGAACAAAGGCCTGTAGTTGTTGCGGAAACTGCCACAGATGTAGGATCAGAGCCAACCAAACAAGAAATTACAAGACAACTTGCATCAAGGTGGAGGGCATTGACTAGTGACGAAAAACGGGTATATGTTGCAATGTTTGAAAGATCAAAGGAGAAGTATGCAGAAGAAATGTCAGCATACATCAAGAAAGAGCAGTAG

Protein sequence:

>DPOGS210873-PA
MTVQQLNSNISDDSDDMVSLPSEEEIYRRKYQLLLERCEVLQQDNERIVNRIHEVKKITKRYKKDIKLLVERLDKHGDPFRTASVEVEVKPKVPVRPPRVGAKTQTQSKQVDKQNASGGKKPAPKRKSKADKPERDPNAPKKPCNAFFQFCQEQRPVVVAETATDVGSEPTKQEITRQLASRWRALTSDEKRVYVAMFERSKEKYAEEMSAYIKKEQ-