| DPOGS210878 | ||
|---|---|---|
| Transcript | DPOGS210878-TA | 864 bp |
| Protein | DPOGS210878-PA | 287 aa |
| Genomic position | DPSCF300027 + 1388817-1393047 | |
| RNAseq coverage | 679x (Rank: top 19%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL020147 | 1e-76 | 64.04% | |
| Bombyx | BGIBMGA007003-TA | 1e-123 | 89.91% | |
| Drosophila | CHIP-PA | 2e-122 | 69.69% | |
| EBI UniRef50 | UniRef50_Q9XYW6 | 2e-120 | 69.69% | CHIP n=22 Tax=Bilateria RepID=Q9XYW6_DROME |
| NCBI RefSeq | XP_002426063.1 | 2e-131 | 75.61% | STIP1 homology and u box-containing protein, putative [Pediculus humanus corporis] |
| NCBI nr blastp | gi|242010626 | 3e-130 | 75.61% | STIP1 homology and u box-containing protein, putative [Pediculus humanus corporis] |
| NCBI nr blastx | gi|242010626 | 8e-128 | 75.61% | STIP1 homology and u box-containing protein, putative [Pediculus humanus corporis] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0000151 | 4.3e-29 | ubiquitin ligase complex | |
| GO:0016567 | 4.3e-29 | protein ubiquitination | ||
| GO:0004842 | 4.3e-29 | ubiquitin-protein ligase activity | ||
| GO:0005488 | 5.8e-27 | binding | ||
| KEGG pathway | phu:Phum_PHUM234540 | 5e-131 | ||
| K09561 (STUB1, CHIP) | maps-> | Ubiquitin mediated proteolysis | ||
| Protein processing in endoplasmic reticulum | ||||
| InterPro domain | [210-283] IPR003613 | 4.3e-29 | U box domain | |
| [15-114] IPR011990 | 5.8e-27 | Tetratricopeptide-like helical | ||
| [212-272] IPR013083 | 8.4e-21 | Zinc finger, RING/FYVE/PHD-type | ||
| Orthology group | MCL12487 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS210878-TA
ATGAGTAAGCATATGTATTCCACCGCTAACTTGACCGATAAAGAATTGAAAGAACAAGGAAACAGGTTGTTTAGTTTGAGAAGATTCGAAGATGCTATGAACTGTTACACGAAGGCTATCATAAAAAATCCATCTGTAGCCACATACTTTACAAATAGAGCGTTATGTCACCTCAAGATGAAGAGATGGGAAGCTACTTGTCAGGATTGCCGAAGAGCCCTGGATATAGACAACAACCAGGTGAAAGGTCATTTCTTTCTTGGCCAGGCCTTGGTTGAGTTGGACTGCTATGATGAAGCTATCAAACACTTACATAGAGCCAATGATCTAGCAAGAGATCAAAAGCTGAATTTCGGCGATGACATAGCAGCTCAGATAAGAATTGCAAGGAAGAAGAGATGGAATGTACAGGAGGAGAAGAGAATATCACAGGAGATTGAACTGCAGACTTATTTAAATAGGCTTATAAATGAGGACATGCAACGTAGAGTAGAATCAATTAAAATAGAAAACATTAATGAAGAAGACACCAATAGCAAAATAGCTAAAGTGGAAGAAGAATGCAACAACTATAGCAGTGAACTTAACAATCTATTTTCAAAAATGGATGAACGGAGGAGGAAACGCGATGTACCAGACTATCTATGCGGCAAAATAAGCTTCGAGATTCTGAACGAGCCTGTCATCACGCCTAGCGGGATAACCTATGAGAAGAAAGACATTGAGGAGCATCTCGAGCGCGTCGGCCATTTCGATCCTGTGACACGTGTGAAGTTAACAGCGGATCAACTCATACCTAACTTCACTATGAAGGAGGTTGTGGACGCCTTCCTCCAGGACAACGAGTGGGCGCTCGATTATTAA
>DPOGS210878-PA
MSKHMYSTANLTDKELKEQGNRLFSLRRFEDAMNCYTKAIIKNPSVATYFTNRALCHLKMKRWEATCQDCRRALDIDNNQVKGHFFLGQALVELDCYDEAIKHLHRANDLARDQKLNFGDDIAAQIRIARKKRWNVQEEKRISQEIELQTYLNRLINEDMQRRVESIKIENINEEDTNSKIAKVEEECNNYSSELNNLFSKMDERRRKRDVPDYLCGKISFEILNEPVITPSGITYEKKDIEEHLERVGHFDPVTRVKLTADQLIPNFTMKEVVDAFLQDNEWALDY-