| DPOGS210898 | ||
|---|---|---|
| Transcript | DPOGS210898-TA | 609 bp |
| Protein | DPOGS210898-PA | 202 aa |
| Genomic position | DPSCF300045 - 686857-687465 | |
| RNAseq coverage | 28x (Rank: top 76%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL002856 | 2e-90 | 94.58% | |
| Bombyx | BGIBMGA003079-TA | 5e-100 | 93.63% | |
| Drosophila | Sox21b-PA | 2e-40 | 68.97% | |
| EBI UniRef50 | UniRef50_UPI0002247669 | 3e-43 | 47.73% | UPI0002247669 related cluster n=3 Tax=unknown RepID=UPI0002247669 |
| NCBI RefSeq | XP_001688246.1 | 1e-39 | 70.69% | AGAP010919-PA [Anopheles gambiae str. PEST] |
| NCBI nr blastp | gi|345494190 | 1e-42 | 47.73% | PREDICTED: transcription factor Sox-14-like [Nasonia vitripennis] |
| NCBI nr blastx | gi|340721649 | 5e-51 | 54.72% | PREDICTED: SOX domain-containing protein dichaete-like [Bombus terrestris] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0003677 | 7.7e-29 | DNA binding | |
| GO:0005515 | 1.6e-23 | protein binding | ||
| KEGG pathway | ||||
| InterPro domain | [1-73] IPR000910 | 7.7e-29 | High mobility group, HMG1/HMG2 | |
| [1-69] IPR009071 | 1.6e-23 | High mobility group, superfamily | ||
| Orthology group | MCL18241 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS210898-TA
ATGAACGCCTTCATGGTCTGGTCCAGGCTACAACGTCGCCAGATCGCCAAGGATAATCCGAAGATGCACAATTCGGAGATATCGAAACGGCTCGGAGCCGAATGGAAGCTGTTGTCTGAAATGCAGAAGAGACCATTCATTGACGAAGCAAAACGACTCCGAGCTCTCCATATGAAAGAGCACCCCGACTACAAGTACCGGCCACGAAGGAAGCCCAAGCCACCGACAGCGGGAGGAGCTCCGGGCGCTGGAGCTTTCCCGAGCTTTCCACTGCCTTACTTCGCGGGTCCAGCACCGACCGTTGGACCGTTGGACGCCCTTTCGTATTCGGCAGTGCCTCCATACTTCCCACATCAGCTGGATCACTTGCAATTCTCAAAACTAATGGCTCCGACCGAGAAGTTGCCGACGGCATCTTCAGCTGCCGCTGTGGTGTCGTCGTTCTATTCATCACTCTACACACAGCCGGCCGCACCTCCGAAGCCGTTCCCATCTCCTCTGTTCCACCAGTACGGAGCAGCGCCGGCTTCTCCTGTGTCTCCGGTGACTTCCACGCAGCACAGCCCTCATGACGACCAGCTCAGGCGGCCGGTTTCAGTTATATATTGA
>DPOGS210898-PA
MNAFMVWSRLQRRQIAKDNPKMHNSEISKRLGAEWKLLSEMQKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKPPTAGGAPGAGAFPSFPLPYFAGPAPTVGPLDALSYSAVPPYFPHQLDHLQFSKLMAPTEKLPTASSAAAVVSSFYSSLYTQPAAPPKPFPSPLFHQYGAAPASPVSPVTSTQHSPHDDQLRRPVSVIY-