DPOGS210912 | ||
---|---|---|
Transcript | DPOGS210912-TA | 474 bp |
Protein | DPOGS210912-PA | 157 aa |
Genomic position | DPSCF300045 - 13851-14404 | |
RNAseq coverage | 353x (Rank: top 33%) |
Annotation | ||||
---|---|---|---|---|
Heliconius | HMEL015808 | 3e-34 | 81.33% |   |
Bombyx | BGIBMGA003065-TA | 3e-38 | 81.05% |   |
Drosophila | Cpr92A-PA | 6e-20 | 65.15% |   |
EBI UniRef50 | UniRef50_B2DBL1 | 2e-35 | 53.61% | Cuticular protein CPR59B n=1 Tax=Papilio xuthus RepID=B2DBL1_9NEOP |
NCBI RefSeq | NP_001166698.1 | 9e-37 | 81.05% | cuticular protein RR-2 motif 59 [Bombyx mori] |
NCBI nr blastp | gi|290563231 | 2e-35 | 81.05% | cuticular protein RR-2 motif 59 precursor [Bombyx mori] |
NCBI nr blastx | gi|290563231 | 8e-48 | 70.67% | cuticular protein RR-2 motif 59 precursor [Bombyx mori] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0042302 | 1.6e-12 | structural constituent of cuticle | |
KEGG pathway |   | |||
InterPro domain | [32-83] IPR000618 | 1.6e-12 | Insect cuticle protein | |
Orthology group | MCL27588 |   | Lepidoptera specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
---|
>DPOGS210912-TA
ATGGCTGCTAAGTTGGTTGTAGTACTCGCCGCCGTGGCCGCTGTGGCTCACTGCTCAGTGGTGCCAGTTGCGCGAGCAGACGCCGACTACACGAGCTTCGCTTACGACGTCGCTGACCCTTACACCGGTGACTTTAAGAGCCAAGTTGAGACCCGCGTTGGTGGCAATGTCCGAGGTCAATACTCACTGCTTGACGCAGATGGCACAAAACGCACAGTCGACTATGCAGCTGATGATCTCAGTGGTTTCAATGCGGTTGTTCGTAAGGACCCAGCTGTTCTGACTGCCCCAGTTGCTGCTGTTTCTCCCGCTGTTGAAGCTCCTGCTGTCCCCTCCGTAATTGCTGCCAGAACTGTTGCTGCACCAGCTATTTATGCTGAACCTGCTCCCGCTCTGGTTGCCGCTCGTGCCTATGCACTTCCTTCAGTATACTCCGCTGGTCACTCCGTTCTTGCTCCTATTAATTCATGGTAA
>DPOGS210912-PA
MAAKLVVVLAAVAAVAHCSVVPVARADADYTSFAYDVADPYTGDFKSQVETRVGGNVRGQYSLLDADGTKRTVDYAADDLSGFNAVVRKDPAVLTAPVAAVSPAVEAPAVPSVIAARTVAAPAIYAEPAPALVAARAYALPSVYSAGHSVLAPINSW-