DPOGS210922 | ||
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Transcript | DPOGS210922-TA | 519 bp |
Protein | DPOGS210922-PA | 172 aa |
Genomic position | DPSCF300045 + 245651-247473 | |
RNAseq coverage | 30163x (Rank: top 0%) |
Annotation | ||||
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Heliconius | HMEL015825 | 9e-89 | 88.95% |   |
Bombyx | BGIBMGA003073-TA | 5e-81 | 87.04% |   |
Drosophila | Tctp-PA | 1e-76 | 78.95% |   |
EBI UniRef50 | UniRef50_Q9VGS2 | 1e-74 | 78.95% | Translationally-controlled tumor protein homolog n=49 Tax=Coelomata RepID=TCTP_DROME |
NCBI RefSeq | NP_001037572.1 | 8e-86 | 87.79% | translationally-controlled tumor protein homolog [Bombyx mori] |
NCBI nr blastp | gi|337263457 | 5e-86 | 88.95% | translationally-controlled tumor protein [Trichoplusia ni] |
NCBI nr blastx | gi|337263457 | 2e-85 | 88.95% | translationally-controlled tumor protein [Trichoplusia ni] |
Group | ||||
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KEGG pathway |   | |||
InterPro domain | [2-172] IPR018105 | 1.3e-94 | Translationally controlled tumour protein | |
[1-172] IPR011323 | 7.9e-70 | Mss4/translationally controlled tumour-associated TCTP | ||
[1-172] IPR011057 | 2.7e-65 | Mss4-like | ||
Orthology group | MCL14431 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS210922-TA
ATGAGGATCTATAAGGATATTATTACTGGTGACGAGATGTTCTCGGACACATACAGAATCAAGCTGGTTGATGAAGTAATTTACGAAGTCACCGGTAAACTGGAGTCAAGAACAGAGGGCGATATCAAACTTGATGGTTTCAATCCTTCAGCTGAAGAAGCCGACGAGGGCACAGACTCGGCGGTCGTTAGCGGTGTAGACATTGTCCTGAACCACAGGCTTGTGGAGACTTATGCCTTTGGTGACAAAAAGTCTTACACCTTGTACCTTAAAGACTACATGAAAAAATTAGTGGCAAAATTAGAAGAAAAATCCCCTGACCAAGTAGATGTTTTTAAGACTAATATGAACAAAGTTATGAAAGACATTCTCAGTAGGTTTAAGGATCTACAGTTTTTCACGGGGGAGTCTATGGATTGTGACGGCATGGTCGCCATGCTGGAATACCGTGACATTGATGGCGTCTCCACCCCCATCATGATGTTCTTCAAGCACGGCCTCGAGGAGGAGAAGTTCTAA
>DPOGS210922-PA
MRIYKDIITGDEMFSDTYRIKLVDEVIYEVTGKLESRTEGDIKLDGFNPSAEEADEGTDSAVVSGVDIVLNHRLVETYAFGDKKSYTLYLKDYMKKLVAKLEEKSPDQVDVFKTNMNKVMKDILSRFKDLQFFTGESMDCDGMVAMLEYRDIDGVSTPIMMFFKHGLEEEKF-