DPOGS210959 | ||
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Transcript | DPOGS210959-TA | 675 bp |
Protein | DPOGS210959-PA | 224 aa |
Genomic position | DPSCF300004 - 827526-849146 | |
RNAseq coverage | 356x (Rank: top 33%) |
Annotation | ||||
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Heliconius | HMEL025033 | 3e-94 | 95.98% |   |
Bombyx | BGIBMGA006388-TA | 9e-60 | 97.73% |   |
Drosophila | abd-A-PB | 2e-67 | 65.46% |   |
EBI UniRef50 | UniRef50_Q07961 | 8e-68 | 72.88% | Homeobox protein abdominal-A homolog n=535 Tax=root RepID=ABDA_TRICA |
NCBI RefSeq | NP_001166808.1 | 8e-97 | 95.09% | abdominal A isoform L [Bombyx mori] |
NCBI nr blastp | gi|290563448 | 1e-95 | 95.09% | abdominal A isoform L [Bombyx mori] |
NCBI nr blastx | gi|290563448 | 7e-124 | 95.09% | abdominal A isoform L [Bombyx mori] |
Group | ||||
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Gene Ontology | GO:0003677 | 4e-25 | DNA binding | |
GO:0006355 | 4e-25 | regulation of transcription, DNA-dependent | ||
GO:0005515 | 6.6e-24 | protein binding | ||
GO:0043565 | 1.6e-23 | sequence-specific DNA binding | ||
GO:0003700 | 1.6e-23 | sequence-specific DNA binding transcription factor activity | ||
KEGG pathway |   | |||
InterPro domain | [93-157] IPR012287 | 4e-25 | Homeodomain-related | |
[73-160] IPR009057 | 6.6e-24 | Homeodomain-like | ||
[99-161] IPR001356 | 1.6e-23 | Homeobox | ||
[157-180] IPR022132 | 1.2e-12 | Homeobox protein | ||
[121-132] IPR020479 | 2.8e-08 | Homeobox, eukaryotic | ||
Orthology group | MCL15824 |   | Insect specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS210959-TA
ATGGTGAACTACGCGCTGGGTCAGCATAACGGCGGAGCGGCGGTGTCCGCTGCCTCGGCGAGTATGGCCGCGGCGGCTCAATTCTACCACCAGGCTGCAGCCTCCGCGGCCTCCGCAGCCTCGGCCGCCTCCGTAGATGCCATGGGCGCCGCGTGCTCGCAGCCCTCCGCCCAGCCTCTCCCGGACATCCCGCGCTATCCCTGGATGTCCATCACCGATTTTCCATTTCCAGATTGGATGAGTCCCTTCGACCGCGTCGTCTGCGGTGAGTTCAATGGACCCAATGGTTGTCCACGGCGACGGGGCAGACAGACATACACCAGGTTTCAGACACTAGAACTAGAAAAGGAATTCCACTTCAACCACTACCTGACGCGTCGGCGTAGGATAGAGATCGCACACGCGCTCTGCCTCACAGAGAGACAGATTAAGATATGGTTCCAGAATCGACGTATGAAATTAAAGAAGGAATTGCGCGCCGTCAAGGAGATAAATGAGCAAGCCCGCAGGGAGAGAGAGGAACAGGACAGGATGAAGCAGCAGCAGCAAGAGAAGCAGGCGAAGCTGGAGAGCCAGCACCATGGCCACCACGTCACCCATCACCACGATCCCATGAAGATGCCTATAGACAAAGGCTCCAGCGACATCCTCAAAGTGAACAAAGTGCCGACGTAA
>DPOGS210959-PA
MVNYALGQHNGGAAVSAASASMAAAAQFYHQAAASAASAASAASVDAMGAACSQPSAQPLPDIPRYPWMSITDFPFPDWMSPFDRVVCGEFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVKEINEQARREREEQDRMKQQQQEKQAKLESQHHGHHVTHHHDPMKMPIDKGSSDILKVNKVPT-