| DPOGS210977 | ||
|---|---|---|
| Transcript | DPOGS210977-TA | 630 bp |
| Protein | DPOGS210977-PA | 209 aa |
| Genomic position | DPSCF300004 - 185650-193995 | |
| RNAseq coverage | 4x (Rank: top 89%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL009521 | 1e-14 | 43.53% | |
| Bombyx | BGIBMGA006483-TA | 2e-15 | 48.68% | |
| Drosophila | ro-PB | 2e-28 | 65.14% | |
| EBI UniRef50 | UniRef50_A7USV8 | 3e-35 | 71.57% | AGAP002372-PA n=1 Tax=Anopheles gambiae RepID=A7USV8_ANOGA |
| NCBI RefSeq | XP_001688391.1 | 6e-36 | 45.12% | AGAP002372-PA [Anopheles gambiae str. PEST] |
| NCBI nr blastp | gi|380027860 | 9e-40 | 48.39% | PREDICTED: homeobox protein rough-like [Apis florea] |
| NCBI nr blastx | gi|195109785 | 5e-41 | 46.51% | GI24523 [Drosophila mojavensis] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0006355 | 1.5e-22 | regulation of transcription, DNA-dependent | |
| GO:0043565 | 1.5e-22 | sequence-specific DNA binding | ||
| GO:0003700 | 1.5e-22 | sequence-specific DNA binding transcription factor activity | ||
| GO:0003677 | 1.8e-20 | DNA binding | ||
| GO:0005515 | 2.6e-20 | protein binding | ||
| KEGG pathway | ||||
| InterPro domain | [109-171] IPR001356 | 1.5e-22 | Homeobox | |
| [87-169] IPR012287 | 1.8e-20 | Homeodomain-related | ||
| [83-170] IPR009057 | 2.6e-20 | Homeodomain-like | ||
| [131-142] IPR020479 | 6.5e-06 | Homeobox, eukaryotic | ||
| Orthology group | MCL15712 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS210977-TA
ATGAACGACGATCCGAAAGATAAGACGACTACTTCCATACACGTTCCAAGGCCGTCTTCGCCTCGTAAATTCTTCGCTCGCATATACGGACACTTAGAGCCGGCCCAGGAAAACAAAAATAGACAACCAGCTCGTGAATCTGAGAGCGAATCATCTTCAGATATTGAAGTCGAGGACAGTGCCAGCGAACAGCTGTCTCCGCTTTGGCAGCCACCTTCTCAATATCCTCTGTGCCCCCGACCGATACTTCTGCCGCATCAACAATTAGCGTTCGGGGCAGGTCTTGCGGCGTTTCTGGCTCGCAGACGACGAAAGGAAAATAGACCACGCAGACAGAGGACTACCTTTTCTGCTCATCAGACTTTACGACTTGAACTAGAATACGCCAGGGGTGAATACGTGGCGAGAGCACGAAGATGTGAGCTTGCATCAGCCTTAACCCTGAGCGAAACTCAAGTAAAAATATGGTTTCAAAACAGAAGAGCCAAAGATAAGAGGATTGAAAAAGCTCATTTAGATCAGCAATACAGGCAACTGGCAGCAGCGTCAGGTTTTTTCCCGCCAATATTCAACGCACAATACGCGCCGCCATGTCCCTGTCTACCGACGCCTCCGAACATTGACAAATAA
>DPOGS210977-PA
MNDDPKDKTTTSIHVPRPSSPRKFFARIYGHLEPAQENKNRQPARESESESSSDIEVEDSASEQLSPLWQPPSQYPLCPRPILLPHQQLAFGAGLAAFLARRRRKENRPRRQRTTFSAHQTLRLELEYARGEYVARARRCELASALTLSETQVKIWFQNRRAKDKRIEKAHLDQQYRQLAAASGFFPPIFNAQYAPPCPCLPTPPNIDK-