Monarch geneset OGS2.0

DPOGS210992
TranscriptDPOGS210992-TA588 bp
ProteinDPOGS210992-PA195 aa
Genomic positionDPSCF300004 + 255012-256667
RNAseq coverage417x (Rank: top 29%)
Annotation
HeliconiusHMEL0250242e-114100.00% 
BombyxBGIBMGA007110-TA2e-7267.23% 
DrosophilaMtl-PB4e-10490.77% 
EBI UniRef50UniRef50_P630005e-8171.96%Ras-related C3 botulinum toxin substrate 1 n=319 Tax=root RepID=RAC1_HUMAN
NCBI RefSeqXP_968112.11e-10793.33%PREDICTED: similar to rac gtpase [Tribolium castaneum]
NCBI nr blastpgi|910770462e-10693.33%PREDICTED: similar to rac gtpase [Tribolium castaneum]
NCBI nr blastxgi|910770462e-10493.33%PREDICTED: similar to rac gtpase [Tribolium castaneum]
Group
Gene OntologyGO:00072644.3e-130small GTPase mediated signal transduction
GO:00056224.3e-130intracellular
GO:00055254.3e-130GTP binding
GO:00150312.1e-22protein transport
GO:00160203.4e-22membrane
GO:00071653.4e-22signal transduction
GO:00061843.4e-22GTP catabolic process
GO:00039243.4e-22GTPase activity
KEGG pathwaynvi:1001154633e-106 
 K04392 (RAC1)maps-> Axon guidance
    Regulation of actin cytoskeleton
    Fc epsilon RI signaling pathway
    Toll-like receptor signaling pathway
    MAPK signaling pathway
    Fc gamma R-mediated phagocytosis
    B cell receptor signaling pathway
    Pathways in cancer
    Shigellosis
    Chemokine signaling pathway
    Leukocyte transendothelial migration
    Natural killer cell mediated cytotoxicity
    Neurotrophin signaling pathway
    Phagosome
    Focal adhesion
    Colorectal cancer
    Amyotrophic lateral sclerosis (ALS)
    Viral myocarditis
    Bacterial invasion of epithelial cells
    Adherens junction
    Renal cell carcinoma
    Pancreatic cancer
    Wnt signaling pathway
    Epithelial cell signaling in Helicobacter pylori infection
    VEGF signaling pathway
InterPro domain[9-182] IPR0035784.3e-130Small GTPase superfamily, Rho type
[8-180] IPR0018068.2e-55Small GTPase superfamily
[6-160] IPR0052251.7e-38Small GTP-binding protein domain
[7-182] IPR0035792.1e-22Small GTPase superfamily, Rab type
[4-182] IPR0208493.4e-22Small GTPase superfamily, Ras type
Orthology groupMCL16354 Insect specific
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS210992-TA
ATGTCGTCAGGAAGACCGATTAAATGTGTTGTAGTGGGCGATGGCACAGTTGGAAAAACATGCATGTTGATATCTTACACTACTGATAGTTTTCCTGGCGAATATGTGCCTACAGTATTTGATAATTATTCAGCACCAATGGTTGTGGACGGAGTGGCTGTGTCACTAGGACTATGGGATACAGCTGGCCAAGAAGATTATGATAGACTAAGACCTTTAAGTTACCCACAAACTGATGTCTTCCTTATATGTTTTAGTGTCACCAGCCCTTCATCTTATGAAAACGTAACTTCAAAGTGGTATCCAGAAATAAAACATCATTGTCCTGATGCACCTATTATCCTGGTTGGTACAAAAATTGATTTAAGAGATGATCGTGAGACACTAAGTCTTTTGTCAGAACAAGGAATGTCTCCATTGAAGAGGGAACAAGGACAAAAATTGGCAAATAAGATAAGAGCTGTAAAGTATATGGAGTGTTCGGCTTTGACACAGCGCGGCCTTAAGCAGGTATTTGATGAAGCCGTGCGTGCAGTGTTACGGCCAGAGCCTCAGAAGAGACACCAAAGGAAGTGTTTAATTATGTAA

Protein sequence:

>DPOGS210992-PA
MSSGRPIKCVVVGDGTVGKTCMLISYTTDSFPGEYVPTVFDNYSAPMVVDGVAVSLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSVTSPSSYENVTSKWYPEIKHHCPDAPIILVGTKIDLRDDRETLSLLSEQGMSPLKREQGQKLANKIRAVKYMECSALTQRGLKQVFDEAVRAVLRPEPQKRHQRKCLIM-