DPOGS210992 | ||
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Transcript | DPOGS210992-TA | 588 bp |
Protein | DPOGS210992-PA | 195 aa |
Genomic position | DPSCF300004 + 255012-256667 | |
RNAseq coverage | 417x (Rank: top 29%) |
Annotation | ||||
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Heliconius | HMEL025024 | 2e-114 | 100.00% |   |
Bombyx | BGIBMGA007110-TA | 2e-72 | 67.23% |   |
Drosophila | Mtl-PB | 4e-104 | 90.77% |   |
EBI UniRef50 | UniRef50_P63000 | 5e-81 | 71.96% | Ras-related C3 botulinum toxin substrate 1 n=319 Tax=root RepID=RAC1_HUMAN |
NCBI RefSeq | XP_968112.1 | 1e-107 | 93.33% | PREDICTED: similar to rac gtpase [Tribolium castaneum] |
NCBI nr blastp | gi|91077046 | 2e-106 | 93.33% | PREDICTED: similar to rac gtpase [Tribolium castaneum] |
NCBI nr blastx | gi|91077046 | 2e-104 | 93.33% | PREDICTED: similar to rac gtpase [Tribolium castaneum] |
Group | ||||
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Gene Ontology | GO:0007264 | 4.3e-130 | small GTPase mediated signal transduction | |
GO:0005622 | 4.3e-130 | intracellular | ||
GO:0005525 | 4.3e-130 | GTP binding | ||
GO:0015031 | 2.1e-22 | protein transport | ||
GO:0016020 | 3.4e-22 | membrane | ||
GO:0007165 | 3.4e-22 | signal transduction | ||
GO:0006184 | 3.4e-22 | GTP catabolic process | ||
GO:0003924 | 3.4e-22 | GTPase activity | ||
KEGG pathway | nvi:100115463 | 3e-106 |   | |
  | K04392 (RAC1) | maps-> | Axon guidance | |
  |   |   | Regulation of actin cytoskeleton | |
  |   |   | Fc epsilon RI signaling pathway | |
  |   |   | Toll-like receptor signaling pathway | |
  |   |   | MAPK signaling pathway | |
  |   |   | Fc gamma R-mediated phagocytosis | |
  |   |   | B cell receptor signaling pathway | |
  |   |   | Pathways in cancer | |
  |   |   | Shigellosis | |
  |   |   | Chemokine signaling pathway | |
  |   |   | Leukocyte transendothelial migration | |
  |   |   | Natural killer cell mediated cytotoxicity | |
  |   |   | Neurotrophin signaling pathway | |
  |   |   | Phagosome | |
  |   |   | Focal adhesion | |
  |   |   | Colorectal cancer | |
  |   |   | Amyotrophic lateral sclerosis (ALS) | |
  |   |   | Viral myocarditis | |
  |   |   | Bacterial invasion of epithelial cells | |
  |   |   | Adherens junction | |
  |   |   | Renal cell carcinoma | |
  |   |   | Pancreatic cancer | |
  |   |   | Wnt signaling pathway | |
  |   |   | Epithelial cell signaling in Helicobacter pylori infection | |
  |   |   | VEGF signaling pathway | |
InterPro domain | [9-182] IPR003578 | 4.3e-130 | Small GTPase superfamily, Rho type | |
[8-180] IPR001806 | 8.2e-55 | Small GTPase superfamily | ||
[6-160] IPR005225 | 1.7e-38 | Small GTP-binding protein domain | ||
[7-182] IPR003579 | 2.1e-22 | Small GTPase superfamily, Rab type | ||
[4-182] IPR020849 | 3.4e-22 | Small GTPase superfamily, Ras type | ||
Orthology group | MCL16354 |   | Insect specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS210992-TA
ATGTCGTCAGGAAGACCGATTAAATGTGTTGTAGTGGGCGATGGCACAGTTGGAAAAACATGCATGTTGATATCTTACACTACTGATAGTTTTCCTGGCGAATATGTGCCTACAGTATTTGATAATTATTCAGCACCAATGGTTGTGGACGGAGTGGCTGTGTCACTAGGACTATGGGATACAGCTGGCCAAGAAGATTATGATAGACTAAGACCTTTAAGTTACCCACAAACTGATGTCTTCCTTATATGTTTTAGTGTCACCAGCCCTTCATCTTATGAAAACGTAACTTCAAAGTGGTATCCAGAAATAAAACATCATTGTCCTGATGCACCTATTATCCTGGTTGGTACAAAAATTGATTTAAGAGATGATCGTGAGACACTAAGTCTTTTGTCAGAACAAGGAATGTCTCCATTGAAGAGGGAACAAGGACAAAAATTGGCAAATAAGATAAGAGCTGTAAAGTATATGGAGTGTTCGGCTTTGACACAGCGCGGCCTTAAGCAGGTATTTGATGAAGCCGTGCGTGCAGTGTTACGGCCAGAGCCTCAGAAGAGACACCAAAGGAAGTGTTTAATTATGTAA
>DPOGS210992-PA
MSSGRPIKCVVVGDGTVGKTCMLISYTTDSFPGEYVPTVFDNYSAPMVVDGVAVSLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSVTSPSSYENVTSKWYPEIKHHCPDAPIILVGTKIDLRDDRETLSLLSEQGMSPLKREQGQKLANKIRAVKYMECSALTQRGLKQVFDEAVRAVLRPEPQKRHQRKCLIM-