DPOGS211018 | ||
---|---|---|
Transcript | DPOGS211018-TA | 444 bp |
Protein | DPOGS211018-PA | 147 aa |
Genomic position | DPSCF300004 + 1282612-1283799 | |
RNAseq coverage | 240x (Rank: top 43%) |
Annotation | ||||
---|---|---|---|---|
Heliconius | HMEL009716 | 6e-10 | 31.94% |   |
Bombyx | BGIBMGA006500-TA | 5e-57 | 65.31% |   |
Drosophila | CG7694-PA | 1e-15 | 32.45% |   |
EBI UniRef50 | UniRef50_E2C9J7 | 9e-46 | 57.43% | RING finger protein 181 n=3 Tax=Formicidae RepID=E2C9J7_HARSA |
NCBI RefSeq | XP_973806.2 | 2e-44 | 55.10% | PREDICTED: similar to RING finger protein 181 [Tribolium castaneum] |
NCBI nr blastp | gi|307175837 | 4e-50 | 61.49% | RING finger protein 181 [Camponotus floridanus] |
NCBI nr blastx | gi|307175837 | 3e-52 | 61.49% | RING finger protein 181 [Camponotus floridanus] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0005515 | 9.2e-08 | protein binding | |
GO:0008270 | 9.2e-08 | zinc ion binding | ||
KEGG pathway |   | |||
InterPro domain | [65-123] IPR013083 | 1.2e-16 | Zinc finger, RING/FYVE/PHD-type | |
[70-110] IPR001841 | 9.2e-08 | Zinc finger, RING-type | ||
Orthology group | MCL17365 |   | Insect specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
---|
>DPOGS211018-TA
ATGACAGATTATTTTCAAGAAATGGGATGGAGAGAATTAGAAGACGGTGAACAGCCTAACCATTTACTGCATATGGCTAGATTTTTAATAGATTTTGGAATGTATGATGACAACTTTACGGGAGAATGGCCAAGGTTGCCACCTCCAGCTTCAAAAGAATCAGTAAAAAATTTAAAAGAAGTCAAAATAGAAGATGAAAATCAGAATTGTCCAATATGCTTAAAGAAATTCAATATTAATGATACTGCAAAAGAAATGCCATGTCATCATTTGTTTCATGAGAAATGTATTTTAACATGGTTAAATCAGACCAATTCATGTCCATTTTGTCGTCATGAACTTCCTACAGACAATGAAGGCTATGAAGCTTTCAAGAAGGAAAAGAAGAGATCGGAACAGAGAAAAGAAGATATAGAAGCTTTACATAATTCTATGTTTAGTTAA
>DPOGS211018-PA
MTDYFQEMGWRELEDGEQPNHLLHMARFLIDFGMYDDNFTGEWPRLPPPASKESVKNLKEVKIEDENQNCPICLKKFNINDTAKEMPCHHLFHEKCILTWLNQTNSCPFCRHELPTDNEGYEAFKKEKKRSEQRKEDIEALHNSMFS-