Monarch geneset OGS2.0

DPOGS211026
TranscriptDPOGS211026-TA819 bp
ProteinDPOGS211026-PA272 aa
Genomic positionDPSCF300004 + 1619953-1638447
RNAseq coverage200x (Rank: top 47%)
Annotation
HeliconiusHMEL0071451e-4945.55% 
BombyxBGIBMGA007895-TA2e-1723.66% 
DrosophilaCG31033-PC4e-6448.77% 
EBI UniRef50UniRef50_E2BZU92e-6870.18%Autophagy-related protein 16-1 n=3 Tax=Formicidae RepID=E2BZU9_HARSA
NCBI RefSeqXP_002430707.13e-7156.20%conserved hypothetical protein [Pediculus humanus corporis]
NCBI nr blastpgi|3504016746e-7156.07%PREDICTED: autophagy-related protein 16-1-like [Bombus impatiens]
NCBI nr blastxgi|3323730341e-6956.20%unknown [Dendroctonus ponderosae]
Group
Gene OntologyGO:00055151.7e-45protein binding
KEGG pathwayppp:PHYPADRAFT_1882783e-16 
 K12857 (SNRNP40, PRP8BP)maps-> Spliceosome
InterPro domain[1-259] IPR0110461.7e-45WD40 repeat-like-containing domain
[4-240] IPR0159437.4e-41WD40/YVTN repeat-like-containing domain
[12-26] IPR0204725.5e-06G-protein beta WD-40 repeat
Orthology groupMCL16953 Patchy
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS211026-TA
ATGGCAGCGAAATTTCTCGGAGAACCTACTAAAGTAATTTCTGGAAGCCATGATCGAACGTTAAAAATATGGGATCTTCGAAGTAGAATGTGTACAGAAACCAAATTCGCAGGATCATCTTGCAACGATCTGGTGACTTCAGACGGCGCAGGCTCTACCATCATCTCAGGACATTTTGACAAACGGATACGCTTCTGGGACATACGCACAGAGATGTCGGCCAACCACATCATGCTCCAGGGCAAAGTCACATCGCTCGACCTCAGCAGAGATAGCAACTATTTGTTGGCCTGTGTCCGAGATGATACTATACAGCTTATAGATTTGCGAATGAACAACATTGTACGGTCTTTTAGTCACGAGTCGTTTAAGGTGGGTTGCGACTGGTCGCGGGCGGCGTTCGGGCCGGGCGGGCGGTTGTTGTCAGTGGGCGCGGCTGATGGAGCCGCTTATGTATGGAACACACACTCTGGTAGATTGGAGGCCGTTCTGAAGGATCATACTCACGAGTCGTTTAAGGTGGGTTGCGACTGGTCGCGGGCGGCGTTCGGGCCGGGCGGGCGGTTGTTGTCAGTGGGCGCGGCTGATGGAGCCGCTTATGTATGGAACACACACTCTGGTAGATTGGAGGCCGTTCTGAAGGATCATACGTCAGCGGTAACAGCAGTATCTTGGCATCCACAATCAGGACTGTTAGCATCAGTCGATAGAGGAAAACGTGCAGTGTGTCATAACGTCGTGGTGTCTAAGGAGGAAGGGAACGAGGTGTACGATTTCCTAAGAGGCATCACCACCGACATTCTTCATAAATTCACATAA

Protein sequence:

>DPOGS211026-PA
MAAKFLGEPTKVISGSHDRTLKIWDLRSRMCTETKFAGSSCNDLVTSDGAGSTIISGHFDKRIRFWDIRTEMSANHIMLQGKVTSLDLSRDSNYLLACVRDDTIQLIDLRMNNIVRSFSHESFKVGCDWSRAAFGPGGRLLSVGAADGAAYVWNTHSGRLEAVLKDHTHESFKVGCDWSRAAFGPGGRLLSVGAADGAAYVWNTHSGRLEAVLKDHTSAVTAVSWHPQSGLLASVDRGKRAVCHNVVVSKEEGNEVYDFLRGITTDILHKFT-