DPOGS211072 | ||
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Transcript | DPOGS211072-TA | 561 bp |
Protein | DPOGS211072-PA | 186 aa |
Genomic position | DPSCF300007 - 1434492-1435266 | |
RNAseq coverage | 58x (Rank: top 69%) |
Annotation | ||||
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Heliconius | HMEL009382 | 2e-69 | 69.89% |   |
Bombyx | BGIBMGA002954-TA | 2e-68 | 68.16% |   |
Drosophila | CG5048-PA | 2e-22 | 43.48% |   |
EBI UniRef50 | UniRef50_F4W684 | 6e-23 | 47.66% | Uncharacterized protein CXorf41 n=4 Tax=Formicidae RepID=F4W684_ACREC |
NCBI RefSeq | XP_001664316.1 | 2e-30 | 45.99% | hypothetical protein AaeL_AAEL014067 [Aedes aegypti] |
NCBI nr blastp | gi|157138741 | 3e-29 | 45.99% | hypothetical protein AaeL_AAEL014067 [Aedes aegypti] |
NCBI nr blastx | gi|157138741 | 3e-28 | 45.99% | hypothetical protein AaeL_AAEL014067 [Aedes aegypti] |
Group | ||||
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KEGG pathway | mbr:MONBRDRAFT_25953 | 2e-11 |   | |
  | K01681 (ACO, acnA) | maps-> | Citrate cycle (TCA cycle) | |
  |   |   | Reductive carboxylate cycle (CO2 fixation) | |
  |   |   | Glyoxylate and dicarboxylate metabolism | |
InterPro domain | [102-176] IPR008978 | 2.2e-06 | HSP20-like chaperone | |
Orthology group | MCL12812 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS211072-TA
ATGGATCTTAGTGCACTTCAAATGGAGAAGTTGGCAGACCTCTTAAGGGCGCCAGAGCCTGAGGTTTTACAAGGAGAGGATTTTCCGGCTACAAACTATGAAGTTACTTCAAACAGAGATACAAAAGTTTCTCAAAACCAAGACGTTTCAAAATACCCGAAAACTATTGAAGAATTTGAACAACAGGAAGCTGAAGAAGCTGAAAACATGGGGAAAGTGGGTTTTGGTGCAGGCGATCGGAAAACTCCTGAGTATACCATGAATTACCAGCAATCTGTTTCTGCTGAAGATGTGTTTTTGCAAATGGGACCCAAAACGCCATCTTCGGCCAGTTGCGAGAACCTTGTTGTCAGGGTTATGATGCCGGGTGATAAGAAAGAGAACGTCGATCTCTCCGTCGACAAAAACAGTGTGACAATCAACTCTTCGCAGTATTATTTGAAGCTCATGTTGCCCCATGAAATAAATCCAGATAACTCCAAAGCTAGCTGGGACGGCGCTAAAGATATTTTATTATTGACGTTGAAATTAGATAGAGAGTTTGATTTTGTTAATTTCTGA
>DPOGS211072-PA
MDLSALQMEKLADLLRAPEPEVLQGEDFPATNYEVTSNRDTKVSQNQDVSKYPKTIEEFEQQEAEEAENMGKVGFGAGDRKTPEYTMNYQQSVSAEDVFLQMGPKTPSSASCENLVVRVMMPGDKKENVDLSVDKNSVTINSSQYYLKLMLPHEINPDNSKASWDGAKDILLLTLKLDREFDFVNF-