| DPOGS211106 | ||
|---|---|---|
| Transcript | DPOGS211106-TA | 381 bp |
| Protein | DPOGS211106-PA | 126 aa |
| Genomic position | DPSCF300007 - 847029-850114 | |
| RNAseq coverage | 36756x (Rank: top 0%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL012452 | 6e-66 | 92.86% | |
| Bombyx | BGIBMGA002981-TA | 2e-66 | 92.86% | |
| Drosophila | chic-PC | 3e-54 | 69.05% | |
| EBI UniRef50 | UniRef50_P25843 | 4e-52 | 69.05% | Profilin n=25 Tax=Pancrustacea RepID=PROF_DROME |
| NCBI RefSeq | NP_001037108.1 | 6e-65 | 92.86% | profilin [Bombyx mori] |
| NCBI nr blastp | gi|112982865 | 2e-63 | 92.86% | profilin [Bombyx mori] |
| NCBI nr blastx | gi|112982865 | 8e-62 | 92.86% | profilin [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0003779 | 3.2e-57 | actin binding | |
| GO:0015629 | 3.2e-57 | actin cytoskeleton | ||
| GO:0007010 | 3.2e-57 | cytoskeleton organization | ||
| GO:0030036 | 1.1e-56 | actin cytoskeleton organization | ||
| KEGG pathway | tca:659243 | 3e-59 | ||
| K05759 (PFN) | maps-> | Shigellosis | ||
| Regulation of actin cytoskeleton | ||||
| InterPro domain | [1-126] IPR002097 | 3.2e-57 | Profilin/allergen | |
| [2-126] IPR005455 | 1.1e-56 | Profilin, plant | ||
| Orthology group | MCL16610 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS211106-TA
ATGAGCTGGCAAGATTATGTCGATAAACAGTTAATTGCATCCAGATGTGTTTCAAAGGCTGCAATTGCCGGTCACGATGGAAATGTCTGGGCTAAATCGGAAGGCTTTGACATATCAAAAGACGAGGTGGCCAAGATAGTGGCTGGTTTTGAAAACGAATCACTACTCACCAGCGGTGGTGTGACGATAGCGGGCACGCGGTACATCTACCTCAGCGGTAACGAACGCATCATTCGCGCTAAACTCGGCAAAGTCGGAGTTCACTGCATGAAGACGCAGCAAGCTGTTGTAATTTCTCTCTACGAAGAACCGATCCAACCCCAGCAAGCTGCTTCCGTAGTCGAGAAGTTAGGAGATTATTTAGTGAACTGTGGTTATTAG
>DPOGS211106-PA
MSWQDYVDKQLIASRCVSKAAIAGHDGNVWAKSEGFDISKDEVAKIVAGFENESLLTSGGVTIAGTRYIYLSGNERIIRAKLGKVGVHCMKTQQAVVISLYEEPIQPQQAASVVEKLGDYLVNCGY-