Monarch geneset OGS2.0

DPOGS211113
TranscriptDPOGS211113-TA762 bp
ProteinDPOGS211113-PA253 aa
Genomic positionDPSCF300007 - 651982-652894
RNAseq coverage175x (Rank: top 50%)
Annotation
HeliconiusHMEL0124356e-11577.55% 
Bombyx% 
DrosophilamRpL10-PA2e-4538.05% 
EBI UniRef50UniRef50_Q16VU41e-5040.47%Mitochondrial ribosomal protein, L10, putative n=4 Tax=Culicidae RepID=Q16VU4_AEDAE
NCBI RefSeqXP_001660051.12e-5140.47%mitochondrial ribosomal protein, L10, putative [Aedes aegypti]
NCBI nr blastpgi|1571231894e-5040.47%mitochondrial ribosomal protein, L10, putative [Aedes aegypti]
NCBI nr blastxgi|1571231896e-4942.44%mitochondrial ribosomal protein, L10, putative [Aedes aegypti]
Group
Gene OntologyGO:00422546.6e-05ribosome biogenesis
GO:00056226.6e-05intracellular
KEGG pathwayame:7267592e-18 
 K04237 (PARD3)maps-> Chemokine signaling pathway
    Endocytosis
    Tight junction
    Neuroactive ligand-receptor interaction
    Adherens junction
Orthology groupMCL16912 Patchy
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS211113-TA
ATGGCTCTAGTAAAAAAAGCGTTACTGGAGACACCTGCTTCATTTTTATTGGCAAAACGATTCCGGGGAAAAGTTAATATCCAAAAACCACGAAAACCTCACTTTGAAAAGCAACTTTTACTCGACTTGACCAAACCTCACTATGGACCTAAAAAGAGCTCTTTGCCAGATATATTTCTTTGTGATAAAGGAAAAGTCCTCTTTTCAAAGGAAGAAATCGATAACCCTTTTGAAAGAATATTGGCTAGAGAATGTTTGAACTGGTTTAACACATCGAAAATGGTGGTATTTCTCCACATGAACTCAATTAGTATGGAGGATAAAACACCAGTTTTTGCTGCACTTAAAAAGAATAATATGAATTTAAGAACTTATGGAAAGAAAATTGTAAGCATGGCAACCAAAGGAACTCGTTATGAAGCTGTTAATCACTTGTTTACATGTCATCAAAATATTATATTTGGACAGCCAGAAAATGCAGCAAAGATGTTTAAAATCCTCAAAAAGACACCTCAAATGGTTGTCATGGCGGGGATTATTAATGATAAATTACTTTCAAAGAACGAGCTGGTCCAGTTTAGTAAGTTGCCGAGTCTGGAGGTAGCAAGGAGTCAACTGTGCTCAGTTCTACAGAGTGCTGCATCCTGTCTTGTTGGACAGTTGAACCAAAATCAACAAGTGTTGGTGTCTCATCTTGAAAAGCATATAGAAGTACAGAACACGCCTGTCAATAGTGGAAATAAAGATAAAACAGAGAGTTAA

Protein sequence:

>DPOGS211113-PA
MALVKKALLETPASFLLAKRFRGKVNIQKPRKPHFEKQLLLDLTKPHYGPKKSSLPDIFLCDKGKVLFSKEEIDNPFERILARECLNWFNTSKMVVFLHMNSISMEDKTPVFAALKKNNMNLRTYGKKIVSMATKGTRYEAVNHLFTCHQNIIFGQPENAAKMFKILKKTPQMVVMAGIINDKLLSKNELVQFSKLPSLEVARSQLCSVLQSAASCLVGQLNQNQQVLVSHLEKHIEVQNTPVNSGNKDKTES-