DPOGS211113 | ||
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Transcript | DPOGS211113-TA | 762 bp |
Protein | DPOGS211113-PA | 253 aa |
Genomic position | DPSCF300007 - 651982-652894 | |
RNAseq coverage | 175x (Rank: top 50%) |
Annotation | ||||
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Heliconius | HMEL012435 | 6e-115 | 77.55% |   |
Bombyx | % |   | ||
Drosophila | mRpL10-PA | 2e-45 | 38.05% |   |
EBI UniRef50 | UniRef50_Q16VU4 | 1e-50 | 40.47% | Mitochondrial ribosomal protein, L10, putative n=4 Tax=Culicidae RepID=Q16VU4_AEDAE |
NCBI RefSeq | XP_001660051.1 | 2e-51 | 40.47% | mitochondrial ribosomal protein, L10, putative [Aedes aegypti] |
NCBI nr blastp | gi|157123189 | 4e-50 | 40.47% | mitochondrial ribosomal protein, L10, putative [Aedes aegypti] |
NCBI nr blastx | gi|157123189 | 6e-49 | 42.44% | mitochondrial ribosomal protein, L10, putative [Aedes aegypti] |
Group | ||||
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Gene Ontology | GO:0042254 | 6.6e-05 | ribosome biogenesis | |
GO:0005622 | 6.6e-05 | intracellular | ||
KEGG pathway | ame:726759 | 2e-18 |   | |
  | K04237 (PARD3) | maps-> | Chemokine signaling pathway | |
  |   |   | Endocytosis | |
  |   |   | Tight junction | |
  |   |   | Neuroactive ligand-receptor interaction | |
  |   |   | Adherens junction | |
Orthology group | MCL16912 |   | Patchy |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS211113-TA
ATGGCTCTAGTAAAAAAAGCGTTACTGGAGACACCTGCTTCATTTTTATTGGCAAAACGATTCCGGGGAAAAGTTAATATCCAAAAACCACGAAAACCTCACTTTGAAAAGCAACTTTTACTCGACTTGACCAAACCTCACTATGGACCTAAAAAGAGCTCTTTGCCAGATATATTTCTTTGTGATAAAGGAAAAGTCCTCTTTTCAAAGGAAGAAATCGATAACCCTTTTGAAAGAATATTGGCTAGAGAATGTTTGAACTGGTTTAACACATCGAAAATGGTGGTATTTCTCCACATGAACTCAATTAGTATGGAGGATAAAACACCAGTTTTTGCTGCACTTAAAAAGAATAATATGAATTTAAGAACTTATGGAAAGAAAATTGTAAGCATGGCAACCAAAGGAACTCGTTATGAAGCTGTTAATCACTTGTTTACATGTCATCAAAATATTATATTTGGACAGCCAGAAAATGCAGCAAAGATGTTTAAAATCCTCAAAAAGACACCTCAAATGGTTGTCATGGCGGGGATTATTAATGATAAATTACTTTCAAAGAACGAGCTGGTCCAGTTTAGTAAGTTGCCGAGTCTGGAGGTAGCAAGGAGTCAACTGTGCTCAGTTCTACAGAGTGCTGCATCCTGTCTTGTTGGACAGTTGAACCAAAATCAACAAGTGTTGGTGTCTCATCTTGAAAAGCATATAGAAGTACAGAACACGCCTGTCAATAGTGGAAATAAAGATAAAACAGAGAGTTAA
>DPOGS211113-PA
MALVKKALLETPASFLLAKRFRGKVNIQKPRKPHFEKQLLLDLTKPHYGPKKSSLPDIFLCDKGKVLFSKEEIDNPFERILARECLNWFNTSKMVVFLHMNSISMEDKTPVFAALKKNNMNLRTYGKKIVSMATKGTRYEAVNHLFTCHQNIIFGQPENAAKMFKILKKTPQMVVMAGIINDKLLSKNELVQFSKLPSLEVARSQLCSVLQSAASCLVGQLNQNQQVLVSHLEKHIEVQNTPVNSGNKDKTES-