DPOGS211121 | ||
---|---|---|
Transcript | DPOGS211121-TA | 762 bp |
Protein | DPOGS211121-PA | 253 aa |
Genomic position | DPSCF300007 - 436490-443456 | |
RNAseq coverage | 211x (Rank: top 46%) |
Annotation | ||||
---|---|---|---|---|
Heliconius | HMEL012421 | 8e-127 | 89.33% |   |
Bombyx | BGIBMGA007432-TA | 1e-88 | 92.12% |   |
Drosophila | CG4502-PA | 1e-77 | 77.19% |   |
EBI UniRef50 | UniRef50_E2BKM4 | 5e-89 | 63.00% | Probable ubiquitin-conjugating enzyme E2 CG4502 n=7 Tax=Coelomata RepID=E2BKM4_HARSA |
NCBI RefSeq | XP_395821.1 | 9e-89 | 64.64% | PREDICTED: similar to CG4502-PA, isoform A [Apis mellifera] |
NCBI nr blastp | gi|307205381 | 2e-88 | 63.00% | Probable ubiquitin-conjugating enzyme E2 CG4502 [Harpegnathos saltator] |
NCBI nr blastx | gi|350399826 | 1e-86 | 65.04% | PREDICTED: ubiquitin-conjugating enzyme E2Q-like protein CG4502-like [Bombus impatiens] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0016881 | 1.5e-09 | acid-amino acid ligase activity | |
KEGG pathway | ame:412360 | 3e-88 |   | |
  | K10582 (UBE2Q) | maps-> | Ubiquitin mediated proteolysis | |
InterPro domain | [80-240] IPR016135 | 6.1e-31 | Ubiquitin-conjugating enzyme/RWD-like | |
[87-203] IPR000608 | 1.5e-09 | Ubiquitin-conjugating enzyme, E2 | ||
Orthology group | MCL12726 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
---|
>DPOGS211121-TA
ATGACGTCCAGATCCAAGGAGAAGGTGGCGGCAGCTTTCAGGAAGCTGTTCCGATCTCCGGAGAAGCTGGACAATGAAGCCGCCGGACCAAGCGGCTCTCCGGCCCGTCGAGGTTTATTTCGTCGACACAGAGACGGCGTTAGCCCGGCGGAAGCAGCTGTTAGTTTGCCTTCAAGCCCCGCTTCCTCGAACCTGTCTAAGAAGAAGGCGGGCTGTGCTAACGAAGTTAGGGAGAGAGCTGCTGGAGTGCGCACAAGGAGACTAATGAAAGAACTTAAAGAAATACAACGCCTACAAGAACACCGACCTAATCCAGTCTTCACGGTGGAGCTTGTAAATGACAACTTGTTCGAGTGGCACGTGAGACTCCATCAGATCGATCCTGAAAGCGATCTGGCGTCAGACCTGAGAGAGATGAGCATCCCCAACATTCTTCTCCATCTCATCTTCCCTGAGAACTTCCCCTTCGCCCCGCCCTTCATGCGTGTCATAGAACCGCGAATAGAAAAAGGATTCGTAATGGAAGGTGGTGCCATTTGTATGGAACTGTTGACGCCTCGCGGCTGGGCGTCCGCTTATACTGTGGAGGCGGTGGTCATGCAGTTCGCCGCTTCGGTGGTCAAAGGCCAGGGTCGTGTCGTCCGCGCCCCGGCTCGCTCCTCCCGGGAATTCTCGCGCAGGAGAGCCGAGGAGGCCTTCAGGTCGCTGGTTAAGACCCACGACAAATACGGCTGGGTCACACCCTCGCTGTCCGACGGTTGA
>DPOGS211121-PA
MTSRSKEKVAAAFRKLFRSPEKLDNEAAGPSGSPARRGLFRRHRDGVSPAEAAVSLPSSPASSNLSKKKAGCANEVRERAAGVRTRRLMKELKEIQRLQEHRPNPVFTVELVNDNLFEWHVRLHQIDPESDLASDLREMSIPNILLHLIFPENFPFAPPFMRVIEPRIEKGFVMEGGAICMELLTPRGWASAYTVEAVVMQFAASVVKGQGRVVRAPARSSREFSRRRAEEAFRSLVKTHDKYGWVTPSLSDG-