| DPOGS211123 | ||
|---|---|---|
| Transcript | DPOGS211123-TA | 714 bp |
| Protein | DPOGS211123-PA | 237 aa |
| Genomic position | DPSCF300007 - 409938-412775 | |
| RNAseq coverage | 58x (Rank: top 69%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL012417 | 1e-109 | 81.01% | |
| Bombyx | BGIBMGA002999-TA | 9e-110 | 79.10% | |
| Drosophila | Tsp47F-PB | 3e-18 | 29.57% | |
| EBI UniRef50 | UniRef50_E2BKP2 | 2e-45 | 37.08% | Tetraspanin-7 n=8 Tax=Endopterygota RepID=E2BKP2_HARSA |
| NCBI RefSeq | XP_974699.2 | 5e-59 | 45.18% | PREDICTED: similar to Tetraspanin-7 (Tspan-7) (Transmembrane 4 superfamily member 2) (Cell surface glycoprotein A15) (PE31) (TALLA homolog) (CD231 antigen) [Tribolium castaneum] |
| NCBI nr blastp | gi|270007959 | 1e-59 | 44.54% | hypothetical protein TcasGA2_TC014706 [Tribolium castaneum] |
| NCBI nr blastx | gi|270007959 | 7e-61 | 44.54% | hypothetical protein TcasGA2_TC014706 [Tribolium castaneum] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0016021 | 5e-36 | integral to membrane | |
| KEGG pathway | ||||
| InterPro domain | [13-226] IPR018499 | 5e-36 | Tetraspanin | |
| [16-39] IPR000301 | 8.5e-21 | Tetraspanin, subgroup | ||
| [109-200] IPR008952 | 3.8e-14 | Tetraspanin, EC2 domain | ||
| Orthology group | MCL16750 | Patchy | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS211123-TA
ATGGGTAATCAGTTTAAAAACGTCGCAATTATAGCCTGCCTTAAAACATTGCTTTTCATCTTCAATATTGTTTTCTGGTTGGCGGGTCTCCTCATCTTGGTGGTAGGCCTCTGGGCTGAGTTCGATCTGTACAAGTATATGGAGTTGTCTCCAGAATTCTCTGGGACCGCTCCCCACGTCATCATCGGTATCTCCGGCTTAATTGTACTCATCAGTTCAGTGGCTTTCTCGTGCATTATCAAAGGCCAGCCGGTTCTGCTGTACATTTATGGAGGATTCCTAGTATGCATTTTCATGATGGACGCGGGTGTCGGGGCATCGGTAGTCTGCTACCGTGATACCTTCGCCAAGGGTCTCCACGATGGACTCACCCACACCATCGTTACTTACAACCCACAGAAACCTAATTTCGACTTCGCTCAATCCACGTTATATTGTTGCGGCGTGAACAACTACACGGACTGGATGCGACTGTCGCCACAAAGAGTGATACCCATCTCCTGCTGCCTCGACCCCAATCGCTGCGTCACGGCCAATTACAACGACGTCTACCAAAGGGGATGTTACGAAGTTATCACGGAATACCTGATCAACAACATGAACATACTGATCGGCGTGGCGGTTGGCACGGCTGTGTTACCACTCGTGGGCGCGCTCCTCTCCTGCTCATTGGCCAGATACATCGAGAAATCAAAATACGACGTCATCAATTAA
>DPOGS211123-PA
MGNQFKNVAIIACLKTLLFIFNIVFWLAGLLILVVGLWAEFDLYKYMELSPEFSGTAPHVIIGISGLIVLISSVAFSCIIKGQPVLLYIYGGFLVCIFMMDAGVGASVVCYRDTFAKGLHDGLTHTIVTYNPQKPNFDFAQSTLYCCGVNNYTDWMRLSPQRVIPISCCLDPNRCVTANYNDVYQRGCYEVITEYLINNMNILIGVAVGTAVLPLVGALLSCSLARYIEKSKYDVIN-