Monarch geneset OGS2.0

DPOGS211128
TranscriptDPOGS211128-TA567 bp
ProteinDPOGS211128-PA188 aa
Genomic positionDPSCF300007 - 342220-342918
RNAseq coverage1547x (Rank: top 8%)
Annotation
HeliconiusHMEL0172324e-5896.69% 
BombyxBGIBMGA003004-TA2e-5793.71% 
DrosophilaSmB-PA2e-5872.68% 
EBI UniRef50UniRef50_P631624e-4471.62%Small nuclear ribonucleoprotein-associated protein N n=169 Tax=Eukaryota RepID=RSMN_HUMAN
NCBI RefSeqNP_001091757.15e-6194.04%small nuclear ribonucleoprotein polypeptide [Bombyx mori]
NCBI nr blastpgi|1482986548e-6094.04%small nuclear ribonucleoprotein polypeptide [Bombyx mori]
NCBI nr blastxgi|1482986545e-10194.68%small nuclear ribonucleoprotein polypeptide [Bombyx mori]
Group
KEGG pathwayame:4093564e-59 
 K11086 (SNRPB, SMB)maps-> Spliceosome
    Systemic lupus erythematosus
InterPro domain[7-82] IPR0066495.1e-26Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type
[2-91] IPR0109205.3e-26Like-Sm ribonucleoprotein (LSM)-related domain
[7-80] IPR0011631.4e-21Like-Sm ribonucleoprotein (LSM) domain
Orthology groupMCL13174 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS211128-TA
ATGACGATCGGCAAGAATAATAAGATGCAACAGCACATAAACTATCGAGTCAGGGTAATATTGCAGGACTCGAGAACATTTATTGGAACATTTAAAGCTTTCGATAAACATATGAATTTAATATTGGGTGACTGTGAGGAGTTTAGAAAAATCAAGTCCAAAAATACCAAAACCGTTGATAGAGAAGAAAAGAGGACACTCGGTTTTGTTTTGCTAAGAGGTGAAAACATAGTGTCCCTCACTATAGAAGGACCTCCGCCTCCGGAAGAAGGCTTGCCTCGCGTCCCGCTGCCTGGTGCTATGGGAGGCCCAGGGGTTGGCAGAGCGGCTGGTCGAGGCGCGGGTATTGGCGGTGCTCCACCTGGTTTACAGGGCCCGGTAAGAGGTGTCGGAGGGCCTTCACAGCAGCATATGGCTCCGGGACCTAGGGGACAGTTATCGGCACCTCCACAGATGCGAGGCGGTCCAATGATGGGTGGTCCTCCGCCTGGTATGATGGGAGCACCTCCAGGAATGGGCCGAGGTGGCCCAGGCAGAGGTGGCCCACCTGGCATGCGTCGATACTAA

Protein sequence:

>DPOGS211128-PA
MTIGKNNKMQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEFRKIKSKNTKTVDREEKRTLGFVLLRGENIVSLTIEGPPPPEEGLPRVPLPGAMGGPGVGRAAGRGAGIGGAPPGLQGPVRGVGGPSQQHMAPGPRGQLSAPPQMRGGPMMGGPPPGMMGAPPGMGRGGPGRGGPPGMRRY-