| DPOGS211179 | ||
|---|---|---|
| Transcript | DPOGS211179-TA | 246 bp |
| Protein | DPOGS211179-PA | 81 aa |
| Genomic position | DPSCF300007 + 433737-434709 | |
| RNAseq coverage | 1942x (Rank: top 6%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL012420 | 4e-38 | 100.00% | |
| Bombyx | BGIBMGA007334-TA | 1e-38 | 100.00% | |
| Drosophila | Nedd8-PA | 5e-37 | 92.50% | |
| EBI UniRef50 | UniRef50_Q9VJ33 | 1e-34 | 92.50% | NEDD8 n=1700 Tax=root RepID=NEDD8_DROME |
| NCBI RefSeq | XP_002429615.1 | 3e-37 | 93.83% | NEDD8 precursor, putative [Pediculus humanus corporis] |
| NCBI nr blastp | gi|242018298 | 8e-36 | 93.83% | NEDD8 precursor, putative [Pediculus humanus corporis] |
| NCBI nr blastx | gi|242018298 | 3e-35 | 93.83% | NEDD8 precursor, putative [Pediculus humanus corporis] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005515 | 1e-27 | protein binding | |
| KEGG pathway | ||||
| InterPro domain | [6-74] IPR000626 | 1e-27 | Ubiquitin | |
| [11-31] IPR019956 | 1.3e-22 | Ubiquitin subgroup | ||
| Orthology group | MCL15851 | Multiple-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS211179-TA
ATGTTGATCAAAGTAAAGACTCTTACAGGAAAAGAAATTGAAATAGATATCGAACCTACAGATAAAGTAGAACGTATCAAAGAAAGAGTCGAAGAAAAAGAGGGTATTCCTCCCCAACAACAGCGACTTATCTTTTCTGGAAAACAGATGAATGATGAAAAAACGGCACAAGACTATAAAGTGCAGGGGGGATCGGTACTGCATTTGGTGTTAGCTCTGAGAGGCGGCGAACAAGATCTCCTGTGA
>DPOGS211179-PA
MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIFSGKQMNDEKTAQDYKVQGGSVLHLVLALRGGEQDLL-