| DPOGS211290 | ||
|---|---|---|
| Transcript | DPOGS211290-TA | 558 bp |
| Protein | DPOGS211290-PA | 185 aa |
| Genomic position | DPSCF300161 + 341055-342392 | |
| RNAseq coverage | 539x (Rank: top 23%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL002650 | 6e-78 | 89.93% | |
| Bombyx | BGIBMGA012508-TA | 3e-35 | 87.67% | |
| Drosophila | CG10466-PA | 2e-55 | 69.34% | |
| EBI UniRef50 | UniRef50_D6WSD7 | 5e-56 | 66.23% | Putative uncharacterized protein n=1 Tax=Tribolium castaneum RepID=D6WSD7_TRICA |
| NCBI RefSeq | NP_001037638.1 | 2e-70 | 87.68% | RNA binding motif protein X-linked 2 [Bombyx mori] |
| NCBI nr blastp | gi|112983436 | 3e-69 | 87.68% | RNA binding motif protein X-linked 2 [Bombyx mori] |
| NCBI nr blastx | gi|112983436 | 2e-71 | 74.32% | RNA binding motif protein X-linked 2 [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0000166 | 4.5e-25 | nucleotide binding | |
| GO:0003676 | 4.9e-24 | nucleic acid binding | ||
| KEGG pathway | ||||
| InterPro domain | [29-112] IPR012677 | 4.5e-25 | Nucleotide-binding, alpha-beta plait | |
| [35-108] IPR000504 | 4.9e-24 | RNA recognition motif domain | ||
| Orthology group | MCL14125 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS211290-TA
ATGAATCCTATGACCAATGTGAAGAATGTTTTAAAATTAAGTGAACGTGAATTAACCGGGAATTCTAAGAGTTCTTGGCATGATCAATACAAAGATAGTGCCTGGATTTTTGTTGGTGGTCTCCCTTACGATTTAACTGAGGGGGATGTTATATGTGTCTTTTCTCAATATGGGGAGATTGTAAACATAAATTTAGTTAGAGACAAAGATACTGGAAGATCAAAAGGTTTTGCATTCATATGCTATGAAGACCAACGGTCAACAATACTTGCTGTTGACAATTTAAATAGTATAAAGATTTTAGGCAGAACAATCCGGGTTGATCATTGTGAGCAGTATCGAGCACCAAATGCAGATATGAGTAAAATTGATGAAGTAACAGCTGCTATAAGAACTGAAGGGTGCGCCCCAGCTCTACTGCCTCAGCCTGTACCTGAAGTGCCTGTTAAAACGGAAAAAGAGCATAAAGAAAAAAAGAAGAAGCACAAAGAAAAAAAGAGCAAAAAGAAAAAGAAGAAAAGAAGTAAATCCAATTCTGATTCTAGTGATAGTGATTAA
>DPOGS211290-PA
MNPMTNVKNVLKLSERELTGNSKSSWHDQYKDSAWIFVGGLPYDLTEGDVICVFSQYGEIVNINLVRDKDTGRSKGFAFICYEDQRSTILAVDNLNSIKILGRTIRVDHCEQYRAPNADMSKIDEVTAAIRTEGCAPALLPQPVPEVPVKTEKEHKEKKKKHKEKKSKKKKKKRSKSNSDSSDSD-