DPOGS211459 | ||
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Transcript | DPOGS211459-TA | 474 bp |
Protein | DPOGS211459-PA | 157 aa |
Genomic position | DPSCF300223 + 150966-182986 | |
RNAseq coverage | 15387x (Rank: top 1%) |
Annotation | ||||
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Heliconius | HMEL013820 | 6e-23 | 94.67% |   |
Bombyx | % |   | ||
Drosophila | RpL35A-PA | 2e-10 | 70.45% |   |
EBI UniRef50 | UniRef50_G1K0J1 | 2e-10 | 69.57% | Ribosomal protein L35Ae (Fragment) n=1 Tax=Rhodnius prolixus RepID=G1K0J1_RHOPR |
NCBI RefSeq | NP_001037243.1 | 1e-20 | 84.00% | ribosomal protein L35A [Bombyx mori] |
NCBI nr blastp | gi|342356405 | 3e-20 | 94.67% | ribosomal protein L35A [Heliconius melpomene cythera] |
NCBI nr blastx | gi|342356405 | 2e-32 | 94.67% | ribosomal protein L35A [Heliconius melpomene cythera] |
Group | ||||
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Gene Ontology | GO:0005840 | 3.9e-17 | ribosome | |
GO:0006412 | 3.9e-17 | translation | ||
GO:0005622 | 3.9e-17 | intracellular | ||
GO:0003735 | 3.9e-17 | structural constituent of ribosome | ||
KEGG pathway | tca:657540 | 3e-09 |   | |
  | K02917 (RP-L35Ae, RPL35A) | maps-> | Ribosome | |
InterPro domain | [49-75] IPR001780 | 3.9e-17 | Ribosomal protein L35A | |
[51-75] IPR009000 | 4.4e-06 | Translation elongation/initiation factor/Ribosomal, beta-barrel | ||
Orthology group |   |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS211459-TA
ATGGCTGACGCAGCCCCATCGACTGCGCCTAAGGCGAAGGCGCCTAAAAGCAAGGCTCCCAAAGAGAAGGCCGAGAAAGCGGCCGCAGCAGCTCCCGCAGAACCCGCGAAGGCGATCCGCAAAGTATCGTCGAAGCCCCGCCACGGCCGACTGTACGCCAAGGCTGTGTTCACAGGCTACAGACGGGGTCTCCGCAACCAACACGAGAACACCGCTCTGTTGAAGCGGTCTAAATACGTTCAGATAATACTGATACAAGCCGATAGTGACGGTTTGGAAATTGCGATAGGAACTGAATTTGGAGCGAAATTTTTGAAAGAGCGGTTCATGTGCGGAGGTTGGTGTGTGTTGACGGTGGCCGGTGGCCGGTGGCCCAAGACTAAGTTAGCGTGGAGAGCCGCCCGCGCACCATACCTCCGGCGCGAGTCGTATAGCGCGCACGCCTTCGCCGCGCTGACGCCGAATACCTTGTGA
>DPOGS211459-PA
MADAAPSTAPKAKAPKSKAPKEKAEKAAAAAPAEPAKAIRKVSSKPRHGRLYAKAVFTGYRRGLRNQHENTALLKRSKYVQIILIQADSDGLEIAIGTEFGAKFLKERFMCGGWCVLTVAGGRWPKTKLAWRAARAPYLRRESYSAHAFAALTPNTL-