| DPOGS211559 | ||
|---|---|---|
| Transcript | DPOGS211559-TA | 387 bp |
| Protein | DPOGS211559-PA | 128 aa |
| Genomic position | DPSCF300159 + 300430-302063 | |
| RNAseq coverage | 0x (Rank: top 98%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL003124 | 4e-59 | 78.20% | |
| Bombyx | BGIBMGA013765-TA | 3e-61 | 82.68% | |
| Drosophila | mRpS16-PA | 2e-46 | 63.57% | |
| EBI UniRef50 | UniRef50_Q9V6Y3 | 2e-44 | 63.57% | Probable 28S ribosomal protein S16, mitochondrial n=19 Tax=Endopterygota RepID=RT16_DROME |
| NCBI RefSeq | XP_001653853.1 | 1e-46 | 61.36% | 28S ribosomal protein S16, mitochondrial [Aedes aegypti] |
| NCBI nr blastp | gi|157123704 | 3e-45 | 61.36% | 28S ribosomal protein S16, mitochondrial [Aedes aegypti] |
| NCBI nr blastx | gi|157123704 | 7e-44 | 61.36% | 28S ribosomal protein S16, mitochondrial [Aedes aegypti] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005840 | 8.5e-62 | ribosome | |
| GO:0006412 | 8.5e-62 | translation | ||
| GO:0005622 | 8.5e-62 | intracellular | ||
| GO:0003735 | 8.5e-62 | structural constituent of ribosome | ||
| KEGG pathway | rru:Rru_A1185 | 1e-11 | ||
| K02959 (RP-S16, rpsP) | maps-> | Ribosome | ||
| InterPro domain | [16-128] IPR000307 | 8.5e-62 | Ribosomal protein S16 | |
| [17-101] IPR023803 | 3.7e-21 | Ribosomal protein S16 domain | ||
| Orthology group | MCL12694 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS211559-TA
ATGCCGCTGCCTCCAGCAACAGGTACCGGGAGGTACTATGCGATTGCGGCAAAATCTATCCGTTTAATTCGTCATGGATGCACAAATAGACCATTCTTTCATATATCAGTTACTCAGCGAAGAAGGCTGAATCGTCAGCCAGTCATAGAACAACTGGGTTCCTATGATCCAATGCCTAATATGAATAATGAAAAGCTGGTTGCATTAAATTTGGACAGAATAAAACATTGGCTCGGTAAAGGTGCTCATGTCTCACAACCTGTGGCAGAATTGTTAGGTCTATCTGGCTTCTTCCCCATACATCCCCGTTCATATATGACGGCCTGGAGGAATAGAAGAACTGAAAGAGACAACCAGGCCAAAGAAAAAGCCGAGGGTAGTTCATAG
>DPOGS211559-PA
MPLPPATGTGRYYAIAAKSIRLIRHGCTNRPFFHISVTQRRRLNRQPVIEQLGSYDPMPNMNNEKLVALNLDRIKHWLGKGAHVSQPVAELLGLSGFFPIHPRSYMTAWRNRRTERDNQAKEKAEGSS-