| DPOGS211564 | ||
|---|---|---|
| Transcript | DPOGS211564-TA | 702 bp |
| Protein | DPOGS211564-PA | 233 aa |
| Genomic position | DPSCF300084 - 504172-505672 | |
| RNAseq coverage | 146x (Rank: top 54%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL016999 | 3e-121 | 94.57% | |
| Bombyx | BGIBMGA006362-TA | 1e-118 | 92.76% | |
| Drosophila | MED4-PA | 2e-50 | 48.74% | |
| EBI UniRef50 | UniRef50_Q9VS38 | 2e-48 | 48.74% | Mediator of RNA polymerase II transcription subunit 4 n=34 Tax=Pancrustacea RepID=MED4_DROME |
| NCBI RefSeq | XP_002424448.1 | 4e-77 | 64.89% | mediator complex subunit, putative [Pediculus humanus corporis] |
| NCBI nr blastp | gi|242007236 | 6e-76 | 64.89% | mediator complex subunit, putative [Pediculus humanus corporis] |
| NCBI nr blastx | gi|242007236 | 7e-79 | 66.39% | mediator complex subunit, putative [Pediculus humanus corporis] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0006357 | 2.3e-35 | regulation of transcription from RNA polymerase II promoter | |
| GO:0016592 | 2.3e-35 | mediator complex | ||
| GO:0001104 | 2.3e-35 | RNA polymerase II transcription cofactor activity | ||
| KEGG pathway | ||||
| InterPro domain | [27-154] IPR019258 | 2.3e-35 | Mediator complex, subunit Med4 | |
| Orthology group | MCL13638 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS211564-TA
ATGGAGCTTATAGCAAAAGAAATCATTGAGGTATCTATAGCACCGAAAACACAGAAGCTGTCTGCGGCAGATCACGCTCAACTAACGGACCTGCTACTTTCTAAAGATGTAGAGTTAAAGAAATCTTTAGAGTTAGCTGATGAGCAGGCGAATATACAACAGAAAATGAATGAACTCAAGGCTGAAGTAGATAATAAGGACCAAGATATTCACCATTTGCAAAGACAACTTAAAGATGCTGAACAAATTTTAGCAACCTCCCTTTACCAAGCTCGACAGAAACTTGCTTCAATTGTCAAATCAAGAAAAAGGCCTGTACCTTCTGAGGAATTAATTAAATTTGCACACAGGATAAGTGCTTCAAATGCAGTGAGTGCCCCACTATCCTGGCAGCCAGGAGATCCTCGCCGACCTTACCCCACAGACTTAGAGATGAGACTGGGAATGCTTGGGCGACTGTGTGATCTACCTCTTAATGGGCACACTCCCTCCACTCTGAATGATCTTCACAGAATAACCACTGGTGGAGTTCCAGCATCAGCAACAAATCAGTTTACATGGCATCCATCAGGAGAATTGCATATGTCGGTTGGAGGTGGAAACTCGGTAGCCATTGATGGACGAAATAAAGAACCGAATCAGGAAGATGTTGAGGTCATGTCGACAGATTCCAGTTCGAGTTCCAGCAGTGATTCGCAATGA
>DPOGS211564-PA
MELIAKEIIEVSIAPKTQKLSAADHAQLTDLLLSKDVELKKSLELADEQANIQQKMNELKAEVDNKDQDIHHLQRQLKDAEQILATSLYQARQKLASIVKSRKRPVPSEELIKFAHRISASNAVSAPLSWQPGDPRRPYPTDLEMRLGMLGRLCDLPLNGHTPSTLNDLHRITTGGVPASATNQFTWHPSGELHMSVGGGNSVAIDGRNKEPNQEDVEVMSTDSSSSSSSDSQ-