DPOGS211624 | ||
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Transcript | DPOGS211624-TA | 360 bp |
Protein | DPOGS211624-PA | 119 aa |
Genomic position | DPSCF300325 - 255573-256138 | |
RNAseq coverage | 227x (Rank: top 44%) |
Annotation | ||||
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Heliconius | HMEL006302 | 4e-32 | 64.04% |   |
Bombyx | BGIBMGA011775-TA | 2e-38 | 58.56% |   |
Drosophila | CG33260-PC | 3e-18 | 45.74% |   |
EBI UniRef50 | UniRef50_E0VW20 | 2e-19 | 50.00% | Putative uncharacterized protein n=1 Tax=Pediculus humanus corporis RepID=E0VW20_PEDHC |
NCBI RefSeq | XP_002430314.1 | 3e-20 | 50.00% | conserved hypothetical protein [Pediculus humanus corporis] |
NCBI nr blastp | gi|242019734 | 9e-19 | 50.00% | conserved hypothetical protein [Pediculus humanus corporis] |
NCBI nr blastx | gi|242019734 | 1e-18 | 50.00% | conserved hypothetical protein [Pediculus humanus corporis] |
Group | ||||
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Gene Ontology | GO:0004518 | 2.6e-25 | nuclease activity | |
GO:0003676 | 2.6e-25 | nucleic acid binding | ||
GO:0006388 | 6.5e-22 | tRNA splicing, via endonucleolytic cleavage and ligation | ||
GO:0000213 | 6.5e-22 | tRNA-intron endonuclease activity | ||
KEGG pathway |   | |||
InterPro domain | [25-114] IPR011856 | 2.6e-25 | Endonuclease TnsA, N-terminal/resolvase Hjc/tRNA endonuclease, C-terminal | |
[26-116] IPR006677 | 6.5e-22 | tRNA intron endonuclease, catalytic domain-like | ||
Orthology group | MCL14059 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS211624-TA
ATGTCATTTGCAGTGAAAAGAAAAGTGCAAATAAATATTCTACAACCAAGTATTTTGGACCAAGTAGGATCTATTCACTATGCAATATATAAAGACTTATGGGAGAAGGGGCATTACATCACTAATGGTTTAAATTTTGGATCAGAGTTTCTTGTTTATCCTGGAGATCCAGTGAAATTTCATGCATCTTACATGGTGCGATGTATCAACAATTCCAAACAATGTTTTCAACCGCCAAGTTTGGTTGCATTCGGTAGACTGTCAGTGGCAGTTAATAAAATGGCTGTACTTGCCTATTGTAGTGATTACGGTAAAGTTGAATACCAAACGCTACAGTGGCATGACAGCATTAATGGTTAA
>DPOGS211624-PA
MSFAVKRKVQINILQPSILDQVGSIHYAIYKDLWEKGHYITNGLNFGSEFLVYPGDPVKFHASYMVRCINNSKQCFQPPSLVAFGRLSVAVNKMAVLAYCSDYGKVEYQTLQWHDSING-