| DPOGS211640 | ||
|---|---|---|
| Transcript | DPOGS211640-TA | 801 bp |
| Protein | DPOGS211640-PA | 266 aa |
| Genomic position | DPSCF300325 + 491-3110 | |
| RNAseq coverage | 750x (Rank: top 17%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL006647 | 4e-123 | 75.27% | |
| Bombyx | BGIBMGA011785-TA | 7e-97 | 68.32% | |
| Drosophila | CG10672-PA | 1e-72 | 55.60% | |
| EBI UniRef50 | UniRef50_Q8SPU8 | 6e-64 | 49.00% | Dehydrogenase/reductase SDR family member 4 n=76 Tax=Eukaryota RepID=DHRS4_BOVIN |
| NCBI RefSeq | XP_308397.4 | 4e-79 | 53.52% | AGAP007475-PA [Anopheles gambiae str. PEST] |
| NCBI nr blastp | gi|260908004 | 2e-106 | 68.68% | short-chain dehydrogenase [Heliothis virescens] |
| NCBI nr blastx | gi|260908004 | 2e-102 | 69.20% | short-chain dehydrogenase [Heliothis virescens] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005488 | 6.9e-73 | binding | |
| GO:0008152 | 4.5e-28 | metabolic process | ||
| GO:0016491 | 4.5e-28 | oxidoreductase activity | ||
| KEGG pathway | aga:AgaP_AGAP007475 | 1e-78 | ||
| K11147 (DHRS4) | maps-> | Peroxisome | ||
| Retinol metabolism | ||||
| InterPro domain | [30-263] IPR016040 | 6.9e-73 | NAD(P)-binding domain | |
| [35-52] IPR002347 | 3.5e-36 | Glucose/ribitol dehydrogenase | ||
| [34-200] IPR002198 | 4.5e-28 | Short-chain dehydrogenase/reductase SDR | ||
| Orthology group | MCL12260 | Multiple-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS211640-TA
ATGTTTCGCCCAAGATTAGTTGCCTCACAGAATGTGCTACCAAAATTATTTCCCCAGGCAGTTAAAGCCAATAGCTTTCACAGTAACCGATTGAAGGGAAAAGTAGCTATAGTTACTGCATCCACAGATGGGATTGGATATGCAATAGCCAAGCGCTTAGGCGATGAGGGTGCCTCAGTAATTATAAGTAGTAGAAAGGAAGATAACGTTAAGAAGGCTACAGACAGCTTACGAAAAGATGGAATAAATGCAGAAGGACTTGTATGTCATGTTGGTAATGCAGATCAAAGAAAAAAATTATTTGAATTTGCCAGCCGTAAATTTGGTGGGATTGATATTCTTGTATCAAATGCTGCTGTTAACCCAGCTGTGTCACCAATTTTGGAGACAGATGAGAAAGTTTTCGACAAAATATTTGAGGTGAACCTTAAATGTTCATGGTTATTGGCAAAAGAAGTTTATCCAGAACTACAGAAGCGTGGAGGTGGAAATATTGTATTCATTTCATCAATCGCTGGATATCAAGCTATGGAACCTCTGGGACCATACAGCATTAGTAAAACTGCCATTATTGGCTTGGCTAAGGCAATAGCCGGTGAAGTAGTGCATGAAAATATAAGAGTGAACTGTATAACATCAAACGAAATAGGTAAAGAGAAGAGTTTGTCTATAGTGCCCATGAAAAGATTCGGTCAACCCTCTGAGATAGCTGCAGCTGTAGCGTTCCTTGTGTCAGATGACTCTAGTTATATAACGGGAGAAACCTTAGTTGTAGCTGGAGGGACATACGCTCATCTATAA
>DPOGS211640-PA
MFRPRLVASQNVLPKLFPQAVKANSFHSNRLKGKVAIVTASTDGIGYAIAKRLGDEGASVIISSRKEDNVKKATDSLRKDGINAEGLVCHVGNADQRKKLFEFASRKFGGIDILVSNAAVNPAVSPILETDEKVFDKIFEVNLKCSWLLAKEVYPELQKRGGGNIVFISSIAGYQAMEPLGPYSISKTAIIGLAKAIAGEVVHENIRVNCITSNEIGKEKSLSIVPMKRFGQPSEIAAAVAFLVSDDSSYITGETLVVAGGTYAHL-