| DPOGS211671 | ||
|---|---|---|
| Transcript | DPOGS211671-TA | 339 bp |
| Protein | DPOGS211671-PA | 112 aa |
| Genomic position | DPSCF300151 + 283375-286206 | |
| RNAseq coverage | 294126x (Rank: top 0%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL013751 | 1e-41 | 96.30% | |
| Bombyx | BGIBMGA001363-TA | 3e-41 | 95.06% | |
| Drosophila | RpS21-PB | 3e-34 | 81.48% | |
| EBI UniRef50 | UniRef50_O76927 | 7e-32 | 81.48% | 40S ribosomal protein S21 n=52 Tax=Eukaryota RepID=RS21_DROME |
| NCBI RefSeq | NP_001037207.1 | 1e-39 | 95.06% | 40S ribosomal protein S21 [Bombyx mori] |
| NCBI nr blastp | gi|74787517 | 5e-39 | 96.30% | Ribosomal protein S21 [Plutella xylostella] |
| NCBI nr blastx | gi|74787517 | 9e-39 | 96.30% | Ribosomal protein S21 [Plutella xylostella] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005840 | 3.9e-54 | ribosome | |
| GO:0006412 | 3.9e-54 | translation | ||
| GO:0005622 | 3.9e-54 | intracellular | ||
| GO:0003735 | 3.9e-54 | structural constituent of ribosome | ||
| KEGG pathway | tca:656304 | 2e-35 | ||
| K02971 (RP-S21e, RPS21) | maps-> | Ribosome | ||
| InterPro domain | [1-87] IPR001931 | 3.9e-54 | Ribosomal protein S21e | |
| Orthology group | MCL12122 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS211671-TA
ATGCAAAACGACGCTGGTGAATTCGTTGACTTGTACTGCCCGAGGAAATGCTCGGCCAGCAACCGTCTCATCCACGCCAAGGACCATGCGTCCGTACAGCTTGTGATAGCTGATGTGGACCCAGCCACCGGCCGTGCCACTGATTCAAGCAAGATGTACGTGATCTGTGGAGCCATCAGACGTATGGGAGAGTCGGACGACTGCATCGTCAGGCTCACCAAGAAAGATGGCATTCTGATTAAGTATGTTCAACCGCCGGGACAGCGCGGCGGCCGGCACGACGACTTCCGCTTACAGGCGAGGGCGCTCACCACCTATCGAACAGGAGTCGGGTGGTAG
>DPOGS211671-PA
MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRATDSSKMYVICGAIRRMGESDDCIVRLTKKDGILIKYVQPPGQRGGRHDDFRLQARALTTYRTGVGW-