| DPOGS211738 | ||
|---|---|---|
| Transcript | DPOGS211738-TA | 366 bp |
| Protein | DPOGS211738-PA | 121 aa |
| Genomic position | DPSCF300561 + 23688-24425 | |
| RNAseq coverage | 64x (Rank: top 68%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL009521 | 1e-38 | 73.73% | |
| Bombyx | BGIBMGA003233-TA | 1e-33 | 63.70% | |
| Drosophila | unpg-PA | 1e-20 | 78.95% | |
| EBI UniRef50 | UniRef50_B4KQ04 | 1e-18 | 80.70% | GI19766 n=2 Tax=Coelomata RepID=B4KQ04_DROMO |
| NCBI RefSeq | XP_001959885.1 | 1e-19 | 80.70% | GF11812 [Drosophila ananassae] |
| NCBI nr blastp | gi|194755210 | 3e-18 | 80.70% | GF11812 [Drosophila ananassae] |
| NCBI nr blastx | gi|194755210 | 3e-17 | 80.70% | GF11812 [Drosophila ananassae] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0003677 | 1.9e-06 | DNA binding | |
| GO:0006355 | 1.9e-06 | regulation of transcription, DNA-dependent | ||
| GO:0043565 | 8.2e-06 | sequence-specific DNA binding | ||
| GO:0003700 | 8.2e-06 | sequence-specific DNA binding transcription factor activity | ||
| KEGG pathway | ||||
| InterPro domain | [10-28] IPR012287 | 1.9e-06 | Homeodomain-related | |
| [11-25] IPR001356 | 8.2e-06 | Homeobox | ||
| Orthology group | MCL16600 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS211738-TA
ATGTCTTGTCCTGGGAAAGAAACCCATGGAAGCGTCAAAATCTGGTTCCAGAACCGTCGCGCTAAATGGAAGCGAGTGAAAGCTGGTCTGGCCTCAGGCAGCCACGTGAAGAGCTCCGGCACCAAGATAGTTGTGCCCATACCGGTACACGTGAACAGATTCGCTGTCAGGACCCAGCATCATCAGATGGAGAAGAATCAATACCGGCTGGACAGAACCCTGCCAGGGTTGCTACAATCACAGAGTTCCGCGTTCCTCTCCGCAACCAAAAACGATAACCGCCCAGACATAACTCGCAACCCTATCTACGACGCTCTTAATCCTATAGTCAGTCTGCGATACAACCAAAATGGCCGACACAGTTAG
>DPOGS211738-PA
MSCPGKETHGSVKIWFQNRRAKWKRVKAGLASGSHVKSSGTKIVVPIPVHVNRFAVRTQHHQMEKNQYRLDRTLPGLLQSQSSAFLSATKNDNRPDITRNPIYDALNPIVSLRYNQNGRHS-