| DPOGS211746 | ||
|---|---|---|
| Transcript | DPOGS211746-TA | 555 bp |
| Protein | DPOGS211746-PA | 184 aa |
| Genomic position | DPSCF300823 - 2506-4131 | |
| RNAseq coverage | 173x (Rank: top 50%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL010318 | 1e-17 | 79.17% | |
| Bombyx | BGIBMGA007914-TA | 2e-86 | 94.74% | |
| Drosophila | Hr39-PB | 8e-64 | 69.59% | |
| EBI UniRef50 | UniRef50_Q17LN1 | 4e-68 | 74.27% | Nuclear hormone receptor ftz-f1 beta n=1 Tax=Aedes aegypti RepID=Q17LN1_AEDAE |
| NCBI RefSeq | XP_001653014.1 | 8e-69 | 74.27% | nuclear hormone receptor ftz-f1 beta [Aedes aegypti] |
| NCBI nr blastp | gi|3834346 | 4e-83 | 94.74% | hormone receptor 39 [Bombyx mori] |
| NCBI nr blastx | gi|3834346 | 8e-88 | 94.74% | hormone receptor 39 [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0003707 | 2.6e-42 | steroid hormone receptor activity | |
| GO:0005634 | 2.6e-42 | nucleus | ||
| GO:0006355 | 2.6e-42 | regulation of transcription, DNA-dependent | ||
| GO:0043401 | 2.6e-42 | steroid hormone mediated signaling pathway | ||
| GO:0003700 | 2.6e-42 | sequence-specific DNA binding transcription factor activity | ||
| GO:0003677 | 4.3e-08 | DNA binding | ||
| KEGG pathway | ||||
| InterPro domain | [14-180] IPR008946 | 2.6e-42 | Nuclear hormone receptor, ligand-binding | |
| [4-148] IPR000536 | 4.7e-21 | Nuclear hormone receptor, ligand-binding, core | ||
| [12-28] IPR001723 | 4.3e-08 | Steroid hormone receptor | ||
| Orthology group | MCL12890 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS211746-TA
ATGTATGAAGCAGCGGGAACATCTGGACATTATAAAAAAATCGACGATCAGATATGTCTGTTGATAAACAGCTGGTGCGAGTTACTGGTGTTGTCCTGTTGCTACAGAGGAGTCAGCACGCCAGGGGAGGTGCGGGTGGGGGGAGGCAGGGGAATAACGCTGCAGCAGAGCGCCAAGTATGGCCTAACTCCATGTATTGAACGTATGTTGAGTTTCACTGATCACTTGAGGAGGCTGCGTGTGGACCGCTACGAGTACGTCGCGCTCAAGGTCATCGTGCTACTCACTTCAGATGCTCCAGAGCTTCATGAAGCAGAGAAAGTGAGAGCTTCCCAGGAGAAGGCGCTGGCAGCCCTACAGGCCTACACCGCCACACACTCACCAGACACACCTGCCAAGTTTGGTGAACTACTGCTGCGAATTCCAGAACTACAGAGAACTTGCCAGTTTTTCATGCAAGTCGGAAAAGAAATGCTCAATCCAGCGAACAAGAGTAAGGACGGAGAGGGACCGAGCTTCAACCTCCTCATGGAACTGCTTCGAGGAGATCATTGA
>DPOGS211746-PA
MYEAAGTSGHYKKIDDQICLLINSWCELLVLSCCYRGVSTPGEVRVGGGRGITLQQSAKYGLTPCIERMLSFTDHLRRLRVDRYEYVALKVIVLLTSDAPELHEAEKVRASQEKALAALQAYTATHSPDTPAKFGELLLRIPELQRTCQFFMQVGKEMLNPANKSKDGEGPSFNLLMELLRGDH-