Monarch geneset OGS2.0

DPOGS211787
TranscriptDPOGS211787-TA2154 bp
ProteinDPOGS211787-PA717 aa
Genomic positionDPSCF300107 + 308066-332688
RNAseq coverage200x (Rank: top 47%)
Annotation
HeliconiusHMEL0216263e-14567.49% 
BombyxBGIBMGA004093-TA0.088.89% 
DrosophilaSema-1a-PD0.063.03% 
EBI UniRef50UniRef50_D6WSR60.070.75%Semaphorin-1a-like protein n=11 Tax=Endopterygota RepID=D6WSR6_TRICA
NCBI RefSeqXP_972078.10.070.07%PREDICTED: similar to Sema-1a CG18405-PA [Tribolium castaneum]
NCBI nr blastpgi|2700111030.070.75%semaphorin-1a-like protein [Tribolium castaneum]
NCBI nr blastxgi|2700111030.070.75%semaphorin-1a-like protein [Tribolium castaneum]
Group
Gene OntologyGO:00055154.4e-172protein binding
GO:00160204.6e-10membrane
GO:00072754.6e-10multicellular organismal development
GO:00048724.6e-10receptor activity
KEGG pathwaynvi:1001147600.0 
 K06842 (SEMA6)maps-> Axon guidance
InterPro domain[16-434] IPR0016274.4e-172Semaphorin/CD100 antigen
[5-455] IPR0159435.2e-159WD40/YVTN repeat-like-containing domain
[455-515] IPR0162014.6e-10Plexin-like fold
[455-513] IPR0036598.2e-10Plexin/semaphorin/integrin
[455-496] IPR0021658.6e-07Plexin
Orthology groupMCL10296 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS211787-TA
GACGACACTCACAAGTTCCTGGGAAATGAAACACACACGGATTATTTCAGATTATTGTTACGAGATGGGAATTATTTACTTGTTGGAGGAAGAAATGTAGTGTATAACCTCAGCCTGACGGATCTGACAGAACAAAGAAGATTGGTGTGGTATTCATCGGAGACGGACGTTCAAATGTGCGTCGTCAAAGGAAAAGATGAGGAGAGCTGTCAGAACTACATTCGAGTCCTGGTGTCTCTTGGTACCGGGCGACTGCTGGTCTGTGGTACCAATAGCTTCAGGCCGTTCTGCAGGGAGTACAGTGTTCAACGCGACTCATACCACATGGAGAAGGAGAAATCTGGCCAAGCTGTTTGTCCATACGACCCCGAGCATAACTCCACTGCTGTTTACGCAGATGCGGAATTATATTCTGGGACAGTGGCGGATTTCAGTGGAATGGAGCCAATTATCTACAGGGAACCGTTACAAACAGAGCCCTACGACTCTATGACGTTAAATGCACCAGATTTCGTGAATTCATTGGTTCACGGTAATTTCGTGTATTTCTTCTTCCGTGAGACCGCCGTCGAGTACATCAACTGTGGAAAGGCGGTATTCTCTCGAGTGGCGAGGGTTTGTCGAGACGATCGCGGCGGTCCTCACAGATTCAAACAAAGATGGACCTCTTTCCTGAAGTCGAGACTCAACTGCTCTGTGGCCGGGGACTTCCCCTTTTACTTCAATGAGATACAATCAACCACGGAGTTGATAGAAGGTGTGTACGGTGGACTAAATGCCCAACTAATATATGGAACTTTCACAACGCCACCGAACAGTATATCAGGGAGTGCTGTGTGTGCGTTCAGTATGCAGGACATAGCTGACACATTCGAGGGAACCTTTAAGGAACAGAGTGCTATTAATTCTAACTGGCTTCCAGTTAATAGCGCCAAGGTGCCGGAACCCCGACCGGGTACATGTCACAACGATTCCAGACAGCTTCCGGACCAGACGTTGAACTTCATCAAAACTCACGCCCTGATGGACGAATCAGTGCCAGCCTTCTTCGGAGAACCAATCGTTATTAGAACAAGCTTCCACTATCGATTCACTCAAATCGCTGTCGATCCGCAAGTGAAGACTCCAGGCGGGAAGGCGTATGACGTTTTGTTCATTGGAACAGATAACGGCAAGATCATAAAAGCCATCAACGCTGTGTCATACGACTCTAACAAGAGAGCGGTCCCGGTGGTGGTAGAGGAGCTCCAGGCCTTCGCTGCCGGCTCTCCCGTACGAGCTCTTCGTGTAGCTCGAGCTGGTAGAGACGCCGCCAGACTGATAGCTGTCTCTGATAGAGAGGTCCTAAGCTTGAGGCTCCATAGATGCTCCAGTGATAAGATCAGCTCTTGCTCTGAGTGTGTGGCGCTTCAAGACCCGTACTGTGCGTGGGATAAGCAGGCTGGTCGGTGTCGTTCCTACTCACACGGAGTCAGCAGATGGTTGGATGAAAACTCTTTCTACCAAAGTGTCAGCACTGGCAGCCACGCCGCCTGCCCACACAGTAAAGACGCGGGTGCTGTTGGTGGCCTTAGTTCAGGGCTATACGACCCACCCGGGGAAAACAAGGGTGAAGTCATCAACATAGTGCAGGATAAAGACGGCAAGAATGGAAACAATAATAATGAAGGGCCAGAAGTTCTAGCCGCTGATCCGCCACCAGCAGCGTATTCAGTGGAGACTCTGGCGTTGGCAGTGGCAGCAGGGGCTCTAGCAGCTCTGGGCGCTGGCTTCGCTGCTGGCTACATCTGTGGTCGGAGGTGCAAGAAGGACGATGATGACAACATGCCCTACCCTGATACTGAGTATGAATACTTCGAGCAACGGCAGAATATTAACAGGATCCAAGCCGAGCCGAAGCTGCTACAACAGGTCGAGGAGGTGACGTACGCAGAGCCTGTCCTGGCTCCGCAGCCTAAACCAGCCTCACCACGCGCCACGCTTCGGAAGCATCCCCCCTACCACCCGCACCACGAGACCCTGTTCCAGTTCCAACCCGACGCCTACCGTCGGGATAACTTCGGAACGCTTCGCTCTCATCAGGGCGATGGCTACCGTCGCGGTAACGACAACGGGTTCTCGACCACGCGCTCAGTGAAGAAGGTGTACCTCTGA

Protein sequence:

>DPOGS211787-PA
DDTHKFLGNETHTDYFRLLLRDGNYLLVGGRNVVYNLSLTDLTEQRRLVWYSSETDVQMCVVKGKDEESCQNYIRVLVSLGTGRLLVCGTNSFRPFCREYSVQRDSYHMEKEKSGQAVCPYDPEHNSTAVYADAELYSGTVADFSGMEPIIYREPLQTEPYDSMTLNAPDFVNSLVHGNFVYFFFRETAVEYINCGKAVFSRVARVCRDDRGGPHRFKQRWTSFLKSRLNCSVAGDFPFYFNEIQSTTELIEGVYGGLNAQLIYGTFTTPPNSISGSAVCAFSMQDIADTFEGTFKEQSAINSNWLPVNSAKVPEPRPGTCHNDSRQLPDQTLNFIKTHALMDESVPAFFGEPIVIRTSFHYRFTQIAVDPQVKTPGGKAYDVLFIGTDNGKIIKAINAVSYDSNKRAVPVVVEELQAFAAGSPVRALRVARAGRDAARLIAVSDREVLSLRLHRCSSDKISSCSECVALQDPYCAWDKQAGRCRSYSHGVSRWLDENSFYQSVSTGSHAACPHSKDAGAVGGLSSGLYDPPGENKGEVINIVQDKDGKNGNNNNEGPEVLAADPPPAAYSVETLALAVAAGALAALGAGFAAGYICGRRCKKDDDDNMPYPDTEYEYFEQRQNINRIQAEPKLLQQVEEVTYAEPVLAPQPKPASPRATLRKHPPYHPHHETLFQFQPDAYRRDNFGTLRSHQGDGYRRGNDNGFSTTRSVKKVYL-